Query= MSMg01no443_m07.b1 MSMg01no443_m07.b1 CHROMAT_FILE:
MSMg01no443_m07.b1 PHD_FILE: MSMg01no443_m07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:11:28 2005
(233 letters)
>mm_chr4_119352575_119353207
Length = 633
Score = 404 bits (209), Expect = e-117
Identities = 227/233 (97%)
Strand = Plus / Plus
Query: 1 gggctgggctgagctgtgctccagggaagaacagagagaagaactcttccaaccgccgac 60
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 201 gggctgggctgagctgtgctccagggaagaacagagagaagacctcttccaaccgccgac 260
Query: 61 tccgcagtctgcagaaagacgcttgcactgagcagccactgaccaagctggcaggtgcac 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 261 tccgcagtctgcagaaagacgcttgcactgagcagccactgaccaagctggcaggtgcgc 320
Query: 121 ccaactcattggttgttttagcgaacaaagtttattagcaacagtgggtcatccttctgc 180
||||||||||||||| ||||| || |||||||||||||||||||||||||||||||||||
Sbjct: 321 ccaactcattggttgctttagtgagcaaagtttattagcaacagtgggtcatccttctgc 380
Query: 181 atgttgtccaggctatcctgatttacagggaagttgagatttgtatagatata 233
||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 381 atgttgtccaggctatcctgatttacagggaagttgagacttgtatagatata 433
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 233
Length of database: 633
Length adjustment: 9
Effective length of query: 224
Effective length of database: 624
Effective search space: 139776
Effective search space used: 139776
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no443_m07.g1 MSMg01no443_m07.g1 CHROMAT_FILE:
MSMg01no443_m07.g1 PHD_FILE: MSMg01no443_m07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:11:28 2005
(246 letters)
>mm_chr4_119423241_119423886
Length = 646
Score = 443 bits (229), Expect = e-129
Identities = 245/257 (95%), Gaps = 11/257 (4%)
Strand = Plus / Minus
Query: 1 ttcatcattttagtctggaaactacctaactgaccctcgaattgaaacagctgcttggag 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 519 ttcatcattttagtctggaaactacctaactgaccctcgaattgaaacagttgcttggag 460
Query: 61 ta-----------tgttttatgttgttcttaattccagctcttagtctttcagcatcaac 109
|| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 tatgttagaaaagtgttttatgttgttcttaattccagctcttagtctttcagcatcaac 400
Query: 110 tgacatcatccctggctgaattcccattcagctctgtccagaaaggcctcatttttcctt 169
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 tgacatcatccctggctgaattcccattcagctctgtccagaaaggcctcatttttcctt 340
Query: 170 accctgtctgtacaagtatggccaagaagtgggaagtagctacatatctatgagcctgtg 229
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 accctgtctgtacaagtatggccaagaagtgggaagtagctacatatctatgagcctgtg 280
Query: 230 tgtccccaccaaggctc 246
|||||||||||||||||
Sbjct: 279 tgtccccaccaaggctc 263
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 246
Length of database: 646
Length adjustment: 9
Effective length of query: 237
Effective length of database: 637
Effective search space: 150969
Effective search space used: 150969
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
