Query= MSMg01no447_g04.b1 MSMg01no447_g04.b1 CHROMAT_FILE:
MSMg01no447_g04.b1 PHD_FILE: MSMg01no447_g04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:16:16 2005
(384 letters)
>mm_chr4_138442692_138443475
Length = 784
Score = 687 bits (355), Expect = 0.0
Identities = 376/385 (97%), Gaps = 4/385 (1%)
Strand = Plus / Minus
Query: 4 ggaattccatcgtgatctctaatcacttactcagcgagttatttaatagagcactttgtg 63
|||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 ggaattccatcgtgatttgtaatcacttactcagcgagttatttaatagagcactttgtg 357
Query: 64 tgtggcgtctgtgatgggcataataggaacagaagcaaaatcaatcctgatcaatcagcg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 tgtggcgtctgtgatgggcataataggaacagaagcaaaatcaatcctgatcaatcagcg 297
Query: 124 tcccctccccagcctctgtgagccccttgcttcctctgctcgcttagccatccatccctt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 tcccctccccagcctctgtgagccccttgcttcctctgctcgcttagccatccatccctt 237
Query: 184 catctatccattaatctgtcatcagtggtaaagccacccatccatccatccatccatcca 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 236 catctatccattaatctgtcatcagtggtaaagccacccatccatccatccatccatcca 177
Query: 244 tccatccatccatccatcca----ccctccaccatgtttccccaccccccacccaagaga 299
|||||||||||||||||||| |||||||||||| |||||||||||||||||||||
Sbjct: 176 tccatccatccatccatccatccaccctccaccatgcacccccaccccccacccaagaga 117
Query: 300 cggggcatggaggcgtcttcaggaaagcagcttttaattatgttggtggtctcagtcgaa 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 116 cggggcatggaggcgtcttcaggaaagcagcttttaattatgttggtggtctcagtcgaa 57
Query: 360 aacatgagggaggagctggtaacag 384
|||||||||||||||||||||||||
Sbjct: 56 aacatgagggaggagctggtaacag 32
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 9
Number of successful extensions: 9
Number of sequences better than 10.0: 1
Number of HSP's gapped: 5
Number of HSP's successfully gapped: 1
Length of query: 384
Length of database: 784
Length adjustment: 9
Effective length of query: 375
Effective length of database: 775
Effective search space: 290625
Effective search space used: 290625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no447_g04.g1 MSMg01no447_g04.g1 CHROMAT_FILE:
MSMg01no447_g04.g1 PHD_FILE: MSMg01no447_g04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:16:16 2005
(246 letters)
>mm_chr4_138362133_138362778
Length = 646
Score = 476 bits (246), Expect = e-139
Identities = 246/246 (100%)
Strand = Plus / Plus
Query: 1 cctggagacagagagtcatgagagtctccaaccaaaagtggcagtgacaagcaccctcac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cctggagacagagagtcatgagagtctccaaccaaaagtggcagtgacaagcaccctcac 260
Query: 61 ttctgtcccctcggtagacaaatacatggatattgttaacacaagattaagggcgggact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttctgtcccctcggtagacaaatacatggatattgttaacacaagattaagggcgggact 320
Query: 121 tgacaggccctagacgaagctaagaatcaacatggaaggctgctagtgagatggctcagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgacaggccctagacgaagctaagaatcaacatggaaggctgctagtgagatggctcagt 380
Query: 181 gggtgaaggtgccagcctctaagcccgatggcctgggacctacatagtagaaggagagaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gggtgaaggtgccagcctctaagcccgatggcctgggacctacatagtagaaggagagaa 440
Query: 241 cagatc 246
||||||
Sbjct: 441 cagatc 446
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 246
Length of database: 646
Length adjustment: 9
Effective length of query: 237
Effective length of database: 637
Effective search space: 150969
Effective search space used: 150969
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
