Query= MSMg01no447_i07.b1 MSMg01no447_i07.b1 CHROMAT_FILE:
MSMg01no447_i07.b1 PHD_FILE: MSMg01no447_i07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:16:26 2005
(423 letters)
>mm_chr4_54773927_54774749
Length = 823
Score = 818 bits (423), Expect = 0.0
Identities = 423/423 (100%)
Strand = Plus / Plus
Query: 1 attactttttcctgtggaatcagacaagcctcttcaaaatctccatacacacatggctcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attactttttcctgtggaatcagacaagcctcttcaaaatctccatacacacatggctcc 260
Query: 61 actgtgagtggctttaacatctgaactggacttcatccgtctctaggagcaaagagtgta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 actgtgagtggctttaacatctgaactggacttcatccgtctctaggagcaaagagtgta 320
Query: 121 aattaatgcctcacatagtgttcataacattcattcatttgccaagtcaacgagtgtcct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aattaatgcctcacatagtgttcataacattcattcatttgccaagtcaacgagtgtcct 380
Query: 181 gacttcaccaagcatgtggtgactgcagggagcagacagacttggcacaggccagaggtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gacttcaccaagcatgtggtgactgcagggagcagacagacttggcacaggccagaggtg 440
Query: 241 ggtgtggcagcagattttcctacagagtaaagaaatgctttgtttttaaaatgggttttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggtgtggcagcagattttcctacagagtaaagaaatgctttgtttttaaaatgggttttc 500
Query: 301 aattcttaggatgtttccgaactttgagaagaaccgacccttgtgaaagaataacatgat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aattcttaggatgtttccgaactttgagaagaaccgacccttgtgaaagaataacatgat 560
Query: 361 aagagcctggggtcgccttctcttcctgtctcaatgcagagacaggaagatggccttggt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aagagcctggggtcgccttctcttcctgtctcaatgcagagacaggaagatggccttggt 620
Query: 421 ggg 423
|||
Sbjct: 621 ggg 623
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 423
Length of database: 823
Length adjustment: 9
Effective length of query: 414
Effective length of database: 814
Effective search space: 336996
Effective search space used: 336996
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no447_i07.g1 MSMg01no447_i07.g1 CHROMAT_FILE:
MSMg01no447_i07.g1 PHD_FILE: MSMg01no447_i07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:16:27 2005
(429 letters)
>mm_chr4_54936451_54937279
Length = 829
Score = 712 bits (368), Expect = 0.0
Identities = 375/380 (98%), Gaps = 5/380 (1%)
Strand = Plus / Minus
Query: 1 cagtgcttcaagagataaagtcaatctgtacggttgaaaagaatataagttgtccttgac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 cagtgcttcaagagataaagtcaatctgtacggttgaaaagaatataagttgtccttgac 321
Query: 61 agcacccaaagtcaggaaaatacacatagaaaagaaactataagtgcttatggcaatgta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 agcacccaaagtcaggaaaatacacatagaaaagaaactataagtgcttatggcaatgta 261
Query: 121 gaatggaagagaccagttgattatgttgcattctccaataaaacaggtcattatgtcacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 gaatggaagagaccagttgattatgttgcattctccaataaaacaggtcattatgtcacc 201
Query: 181 aaaaaaaaaaaaaaaa-----gaaaaaaagaaagaaagcaactgtatcactggtgtcagg 235
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 200 aaaaaaaaaaaaaaaaaaaaagaaaaaaagaaagaaagcaactgtatcactggtgtcagg 141
Query: 236 cagatgagatggctccatggttcagagcacttgcttctcttctggagtacatgaatgcac 295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140 cagatgagatggctccatggttcagagcacttgcttctcttctggagtacatgaatgcac 81
Query: 296 ttcccagcattcctaaagggaatgctctcctaaagggaggtgctcaatggtcttaactcc 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80 ttcccagcattcctaaagggaatgctctcctaaagggaggtgctcaatggtcttaactcc 21
Query: 356 tactccaggggattggatgc 375
||||||||||||||||||||
Sbjct: 20 tactccaggggattggatgc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 429
Length of database: 829
Length adjustment: 9
Effective length of query: 420
Effective length of database: 820
Effective search space: 344400
Effective search space used: 344400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
