Query= MSMg01no448_k18.b1 MSMg01no448_k18.b1 CHROMAT_FILE:
MSMg01no448_k18.b1 PHD_FILE: MSMg01no448_k18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:18:01 2005
(366 letters)
>mm_chr4_124575609_124576373
Length = 765
Score = 671 bits (347), Expect = 0.0
Identities = 358/363 (98%), Gaps = 5/363 (1%)
Strand = Plus / Plus
Query: 5 gaattcagcctgtcccgg--acaggggagagagagtacgctcagcagctgtgcagtggag 62
|||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcagcctg--ccggggacaggggagagagagtacgctcagcagctgtgcagtggag 262
Query: 63 cgacaggctgctattgtccggctcacaaagacattgcttttttcaaagggtcaggcactg 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 cgacaggctgctattgtccggctcacaaagacattgcttttttcaaagggtcaggcactg 322
Query: 123 ggnggaaagactaaaggatttttttaaagttatttttaggatgggagacagtaccgctca 182
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 gg-ggaaagactaaaggatttttttaaagttatttttaggatgggagacagtaccgctca 381
Query: 183 gttggtagtgtagcctagggttcactacagccacatgggtctgtctagtcccactggctt 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 gttggtagtgtagcctagggttcactacagccacatgggtctgtctagtcccactggctt 441
Query: 243 tacagaggttaaaaatacgacactccctccctgtcccctataccagcaatcagctgtcaa 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 tacagaggttaaaaatacgacactccctccctgtcccctataccagcaatcagctgtcaa 501
Query: 303 ctgtgagttttggctccagtgatgtccatcggcatcattggaatttaaattgggcctact 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 ctgtgagttttggctccagtgatgtccatcggcatcattggaatttaaattgggcctact 561
Query: 363 ggg 365
|||
Sbjct: 562 ggg 564
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 366
Length of database: 765
Length adjustment: 9
Effective length of query: 357
Effective length of database: 756
Effective search space: 269892
Effective search space used: 269892
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no448_k18.g1 MSMg01no448_k18.g1 CHROMAT_FILE:
MSMg01no448_k18.g1 PHD_FILE: MSMg01no448_k18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:18:01 2005
(240 letters)
>mm_chr4_124740950_124741589
Length = 640
Score = 464 bits (240), Expect = e-135
Identities = 240/240 (100%)
Strand = Plus / Minus
Query: 1 actatgggcagccattgcaaacacagcactttcagaacctccacactcccaacacacaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 actatgggcagccattgcaaacacagcactttcagaacctccacactcccaacacacaca 381
Query: 61 aatgcttcctcgtggcttgcatgaggtttatggtgttctgtgtcgccaccataagccagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 aatgcttcctcgtggcttgcatgaggtttatggtgttctgtgtcgccaccataagccagt 321
Query: 121 gtggggaattcccattgcatcttctattcgaatcaagcaacatgaccacacatctgtcct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 gtggggaattcccattgcatcttctattcgaatcaagcaacatgaccacacatctgtcct 261
Query: 181 caacacgctaggcaggtatgacctggaacagagggttgtagtcttgtggagaacagagac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 caacacgctaggcaggtatgacctggaacagagggttgtagtcttgtggagaacagagac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 240
Length of database: 640
Length adjustment: 9
Effective length of query: 231
Effective length of database: 631
Effective search space: 145761
Effective search space used: 145761
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
