NNTATTTATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXCGCGGAATTCCTTTTCTTTTCTCAAAAAAAAAAGGTTTATTTTTAA
AAATTTTGTACATCCGTGTCTGTGTGTGTGAGTGCAGGTGCCCACGGCAT
CCTGAAGAAGCCATCAGGCCCACTGGAGCTGGGGTTACAGGTGGCGTGTG
CTTAGACTATAACTCAGGCCCTCTGTAAGAGCAGAGCGTTCCTAAAGGCT
GAGCCATCTCTCCAGCCTCAAGGATGTCTTCCTGGTTTTGTTGGCTTGTT
GTGTTTATTGTTCTTGTTTGTTTGAGAAATGTTCTAACTCTTCCGTCCAG
GCTGGTCTTGAACTTTGAGCCATCCCCCTGCCTCAGTACCCTGAGTGAGG
CTGGAGTTTCAAGATGTCTAGCTTAAGTTTTAAACTATATATTTTTGTTT
GTTTGTTTTATTTTGTTTCAAGACAGGGTCTCACTATGTAGCCCTGGCTA
TCCTGAAATTCACTCTATCGACCAGGCGGGCTTCGAACTCACAGAGCTCC
ATGTACCTCTGCCGCCTGAGTGCTGGGATTANAGGTGTGCGCCTCTACAC
CCAGCTCAAACTCCTTTTCTTTTTTAACTTAAGATATGAGGGATGTATGT
TATGAAGTGAATGAATTAGCCCTCAGAGAGTGGAGAATATTGAGTTTCCT
TCTCTCTGTGCCCGTGAACACTTTGTCCCTTGCTTCATCCT

NAAAANAACTATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGTCTCTTCTTCCTT
GAGCACTTCATGCACATGGCACACATGCACATTCACAAAGCACAGAGGTG
GAGACAAGGCCATCCTGGGCTACACAGCAGATTCCAGGCCAGCCTTGGGT
TCATAAAAGTCTCAAAAAGACTAAACCAACACGTCAACAAATTTTTCTAG
AAACTTGTAAAACAGAGAGTTAAGCCTTGGGGGGATGGTTCAGTGTTTAA
GAGCACAGGAAAAAAATGGGTAGCACTAAGAGGTGGGGTGATAAGGAATA
ACGGGAGCTTACTGGCTGGCTGGCCTAGGAAAATGGCCAGCCTAGACGAA
GCGCTTTCTTTCAGGCTTGGCGAGAAACCCTGTTTCAAGGGAATTAGGGA
ACGAGCAATAGAGGAAAACCTCCAACACCTTCCTCTGACCCCGCAGGTGC
GTGCACAGGTGAAATGCACACCCTTTGCTCTCATGACCAGCCCCTCCCCA
GGTACCAAACAAATCATTGTAGACCTTCTAGTGTTTTGTGTGCTCAGTTT
ATCATTCCTATTACTTTATAAAAATTAAAATGTCTGTGATGTGTGTTCTA
GACTGGACCTAGAGGAATTTTAACCAAAACTTGACTGATGGGAAATGCTT
TGGTAATAAACTGAGGGTCTGTATCTCATTATATTTATGGGGGGGAAAAA
N

Query= MSMg01no449_l24.g1 MSMg01no449_l24.g1 CHROMAT_FILE:
MSMg01no449_l24.g1 PHD_FILE: MSMg01no449_l24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:19:27 2005
         (488 letters)



>mm_chr4_130287135_130288022
          Length = 888

 Score =  944 bits (488), Expect = 0.0
 Identities = 488/488 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   aggtctcttcttccttgagcacttcatgcacatggcacacatgcacattcacaaagcaca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 aggtctcttcttccttgagcacttcatgcacatggcacacatgcacattcacaaagcaca 561

                                                                       
Query: 61  gaggtggagacaaggccatcctgggctacacagcagattccaggccagccttgggttcat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 gaggtggagacaaggccatcctgggctacacagcagattccaggccagccttgggttcat 501

                                                                       
Query: 121 aaaagtctcaaaaagactaaaccaacacgtcaacaaatttttctagaaacttgtaaaaca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 aaaagtctcaaaaagactaaaccaacacgtcaacaaatttttctagaaacttgtaaaaca 441

                                                                       
Query: 181 gagagttaagccttggggggatggttcagtgtttaagagcacaggaaaaaaatgggtagc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gagagttaagccttggggggatggttcagtgtttaagagcacaggaaaaaaatgggtagc 381

                                                                       
Query: 241 actaagaggtggggtgataaggaataacgggagcttactggctggctggcctaggaaaat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 actaagaggtggggtgataaggaataacgggagcttactggctggctggcctaggaaaat 321

                                                                       
Query: 301 ggccagcctagacgaagcgctttctttcaggcttggcgagaaaccctgtttcaagggaat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ggccagcctagacgaagcgctttctttcaggcttggcgagaaaccctgtttcaagggaat 261

                                                                       
Query: 361 tagggaacgagcaatagaggaaaacctccaacaccttcctctgaccccgcaggtgcgtgc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 tagggaacgagcaatagaggaaaacctccaacaccttcctctgaccccgcaggtgcgtgc 201

                                                                       
Query: 421 acaggtgaaatgcacaccctttgctctcatgaccagcccctccccaggtaccaaacaaat 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 acaggtgaaatgcacaccctttgctctcatgaccagcccctccccaggtaccaaacaaat 141

                   
Query: 481 cattgtag 488
           ||||||||
Sbjct: 140 cattgtag 133


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 488
Length of database: 888
Length adjustment: 10
Effective length of query: 478
Effective length of database: 878
Effective search space:   419684
Effective search space used:   419684
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)