Query= MSMg01no453_b08.b1 MSMg01no453_b08.b1 CHROMAT_FILE:
MSMg01no453_b08.b1 PHD_FILE: MSMg01no453_b08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:23:50 2005
(650 letters)
>mm_chr4_70677006_70678060
Length = 1055
Score = 1193 bits (617), Expect = 0.0
Identities = 641/651 (98%), Gaps = 5/651 (0%)
Strand = Plus / Plus
Query: 5 gaattcctagtgtaatatgacatatttatatgtacattgtattgctttttataaatttat 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcctagtgtaatatgacatatttatatgtacattgtattgctttttataaatttat 264
Query: 65 ttacagcatggatattcctgtatgctaaatccattttctt-gttatatttcagccctaac 123
|| ||||||||||||||||||||||||||||||||||| | |||||||||||||||||||
Sbjct: 265 ttgcagcatggatattcctgtatgctaaatccattttcctagttatatttcagccctaac 324
Query: 124 cacaatacctattttattaaagaaatcactatttttctagaatttattttataaatggaa 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cacaatacctattttattaaagaaatcactatttttctagaatttattttataaatggaa 384
Query: 184 ggttgatgtgg----ttgatactgtaaggaaggacttcgtttatacaaaatagtgtaaat 239
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ggttgatgtggactgttgatactgtaaggaaggacttcgtttatacaaaatagtgtaaat 444
Query: 240 agtacagaccacgtgaattcaacatggtagtaagtccaatatgaaataactggaaaaaag 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 agtacagaccacgtgaattcaacatggtagtaagtccaatatgaaataactggaaaaaag 504
Query: 300 gtaggtatagaaaaggggggatgagggtaagaaagaaatattctacacttcatgttaaaa 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gtaggtatagaaaaggggggatgagggtaagaaagaaatattctacacttcatgttaaaa 564
Query: 360 acagaaaaatcatgattgtacaaaagggcacaattcattatgttgtctctatggagagca 419
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 565 acagaaaaatcatgattgtacaaaagtgcacaattcattatgttgtctctatggagagca 624
Query: 420 agtgtacctatgtatgaatgagaatttgtgattgcggcatggccatattaaggatcctag 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 agtgtacctatgtatgaatgagaatttgtgattgcggcatggccatattaaggatcctag 684
Query: 480 tgcatcaggcctgtgggaatagcaaggttagcaacaagagaatgacaaggccctcatctg 539
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 685 tgcatcaggcctgtgggaatagcaaagttagcaacaagagaatgacaaggccctcatctg 744
Query: 540 atccaactacagaagctgacaatatgtgcagaacgtataaggatagtggcctctttcctg 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 atccaactacagaagctgacaatatgtgcagaacgtataaggatagtggcctctttcctg 804
Query: 600 atgactgaagcctaagactgtttccatacttagactccttaccgaaattag 650
||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 805 atgactgaagcctaagactgtttccatacttagactccttaccaaaattag 855
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 650
Length of database: 1055
Length adjustment: 10
Effective length of query: 640
Effective length of database: 1045
Effective search space: 668800
Effective search space used: 668800
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no453_b08.g1 MSMg01no453_b08.g1 CHROMAT_FILE:
MSMg01no453_b08.g1 PHD_FILE: MSMg01no453_b08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:23:50 2005
(615 letters)
>mm_chr4_70738416_70739429
Length = 1014
Score = 1127 bits (583), Expect = 0.0
Identities = 607/615 (98%), Gaps = 1/615 (0%)
Strand = Plus / Minus
Query: 1 aaggttaaaaaccgtaccaggtctattgtattcaagatagtgcattcagcatgaggagta 60
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 814 aaggttaaacaccgtaccaggtctattgtattcaagatagtgcattcagcatgaggagta 755
Query: 61 agttcagcacaaggcagtatttcaagatctttaaagattgaaatacaacttatgaaagta 120
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 754 agttcagcacaaggcagtatttcaggatctttaaagattgaaatacaacttatgaaagta 695
Query: 121 tgtgtacatggacagatagaccagactcaacaaactattataatattcttaatattactt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 694 tgtgtacatggacagatagaccagactcaacaaactattataatattcttaatattactt 635
Query: 181 cttattactctgccctctttgccttcactaaacccattataggttactcaaagtcatggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 cttattactctgccctctttgccttcactaaacccattataggttactcaaagtcatggg 575
Query: 241 agtttagatatgagtaaacttctggggaagatagtcccattttattctatgcattagctg 300
||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| ||
Sbjct: 574 agtttagatatgagtaaacctctggggaagatagtcccattttgttctatgcattagttg 515
Query: 301 tgaggaatatacactggctgttggtcagtcttagcacaaagagaagccttcctttctttc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 tgaggaatatacactggctgttggtcagtcttagcacaaagagaagccttcctttctttc 455
Query: 361 aaataaaaagctcaggaggctactagggcagggattacaagaccagtataatcaaaaagt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 aaataaaaagctcaggaggctactagggcagggattacaagaccagtataatcaaaaagt 395
Query: 421 tctggttcataggtttttgttttcacatagcataataaagcacatgtgatatgcacatct 480
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 tctggttcatgggtttttgttttcacatagcataataaagcacatgtgatatgcacatct 335
Query: 481 aacagggaagggtccaaaagccttgttcatataaaacaaacagaactcagtagtatttat 540
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 aacagggatgggtccaaaagccttgttcatataaaacaaacagaactcagtagtatttat 275
Query: 541 taggtattttttgtgtccataagacattaatatgagtggattatatggatgtggcaaatg 600
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 taggt-ttttttgtgtccataagacattaatatgagtggattatatggatgtggcaaatg 216
Query: 601 tgttcatgcccagat 615
|||||||||||||||
Sbjct: 215 tgttcatgcccagat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 615
Length of database: 1014
Length adjustment: 10
Effective length of query: 605
Effective length of database: 1004
Effective search space: 607420
Effective search space used: 607420
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
