TCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCTTGTATGCTAATCATTAAGGCTTAAATCATCTATTTGTCTATAT
AGCATCACTACAAGCTAGTAGATCTTCATGGATCTGTAGAGATCTGCTCC
AAAGAGGTGTGATACTACTTAGTTATTGTTACATATGTTTAATAATAACA
GGAAAAGAACATTAATAACCGGAATCTTTCCTAAAATGAATCCCTTACAG
CCTTGCTTAATAAGGACACACCTGTCACAGATTCTACAACAATCTGAAGC
AGCCATTTCAGGATGATCACCTGCTAGTTATTAGCTTGTCCCAATATGGC
CCCTAATAATTGACTATGTCCTTTGTCTTACATAAGCTTTCCAGTTTCAT
GAGGTCCCGTTTATCAATTCTTGATCATAGAGCCTGAGCCATTGGAATTC
TGTTTAGGAAACTATCCCCAGTGCCAATGAGTTTGAGGCTCTTTCCTACT
TTCTTTTCTATTAGAGGCAGTGTATCTTGTTTTATGTTGAGGTCCTTATT
CCACTTGGACTTGAGCTTTGTCCAAGGTGACAAATATGGAATGATTTTCA
TTTTTTTCTCAATACACATTGCCAGTTAGACCATTTATTGAAGATGCTTT
CTTTTTTCCATTGCATATTTTTGGGTTCAAGTAGAACCCAAAAGTGGGTG
GTTTTATTTCTGGGTCTTCAATACTAA

CATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXAATTAATTTTGAATAAATAATTGTA
ATTTTAAGTTAATAACATATCAGAAGCATTTATAACATTACATAAGCATC
AAAATATAAAAATATAAAGTTGATAAAATATATACTAGCATTGTCATGTT
CCAAAGGTGTTCAACTGCCTAATGGCTTCTCTTACTTGATATCTTGCATT
TTATTTTCTAGAATCATTTCTTGTTCTCCTGTTATGAAATACTATAAACT
TGAAAATATCTATTATCATAAAAAGTCTGTTTGTAGTAGGGTCTGAAGGG
GATAACAGGATTAACAAACCCTGACAATGGCTGTTAAGGATCTAATGAAT
CTGCCAATATACAAAACATATTCACAAATTATTCTAATGCTTAGAAGCAT
GTAACAAGCTCAACAATTAGCAACAGAAAATGCTATGGGAGTTCAGAAGC
AATGCTCAGTTCCAGTAAAGGAAATTGAGATTCAGTGCGATTTGAGGTTC
ACTTTGAAAGCTGGTATGGTTTTATACAATGAAGAGACTGGCCGAAACTT
CAAATGATGCAATATGTATTATTTATGTACTATTAGTTCTTTAAGAATTG
ATGTTGAATAGTATTTCCTGCTAATATGTAGAACAATTTATCATGAAAGA
ATACTTGTTTTGCTTTTGCCTTTAATTAATAN

Query= MSMg01no455_g02.g1 MSMg01no455_g02.g1 CHROMAT_FILE:
MSMg01no455_g02.g1 PHD_FILE: MSMg01no455_g02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:26:52 2005
         (646 letters)



>mm_chr4_78483436_78484481
          Length = 1046

 Score = 1195 bits (618), Expect = 0.0
 Identities = 639/646 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   aattaattttgaataaataattgtaattttaagttaataacatatcagaagcatttataa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 846 aattaattttgaataaataattgtaattttaagttaataacatatcagaagcatttataa 787

                                                                       
Query: 61  cattacataagcatcaaaatataaaaatataaagttgataaaatatatactagcattgtc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 786 cattacataagcatcaaaatataaaaatataaagttgataaaatatatactagcattgtc 727

                                                                       
Query: 121 atgttccaaaggtgttcaactgcctaatggcttctcttacttgatatcttgcattttatt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 726 atgttccaaaggtgttcaactgcctaatggcttctcttacttgatatcttgcattttatt 667

                                                                       
Query: 181 ttctagaatcatttcttgttctcctgttatgaaatactataaacttgaaaatatctatta 240
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 666 ttctagaatcatttcttgttctcctgttatgaaatactataaatttgaaaatatctatta 607

                                                                       
Query: 241 tcataaaaagtctgtttgtagtagggtctgaaggggataacaggattaacaaaccctgac 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 tcataaaaagtctgtttgtagtagggtctgaaggggataacaggattaacaaaccctgac 547

                                                                       
Query: 301 aatggctgttaaggatctaatgaatctgccaatatacaaaacatattcacaaattattct 360
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 aatggctgttaaggagctaatgaatctgccaatatacaaaacatattcacaaattattct 487

                                                                       
Query: 361 aatgcttagaagcatgtaacaagctcaacaattagcaacagaaaatgctatgggagttca 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 aatgcttagaagcatgtaacaagctcaacaattagcaacagaaaatgctatgggagttca 427

                                                                       
Query: 421 gaagcaatgctcagttccagtaaaggaaattgagattcagtgcgatttgaggttcacttt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 426 gaagcaatgctcagttccagtaaaggaaattgagattcagtgcgatttgaggtacacttt 367

                                                                       
Query: 481 gaaagctggtatggttttatacaatgaagagactggccgaaacttcaaatgatgcaatat 540
           ||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||
Sbjct: 366 gaaagctggtatggttttatacaataaagagactggccaaaacttcaaatgatgcaatat 307

                                                                       
Query: 541 gtattatttatgtactattagttctttaagaattgatgttgaatagtatttcctgctaat 600
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 306 gtattatttatgtactattagttctttcagaattgatgttgaatagtatttcctgctaat 247

                                                         
Query: 601 atgtagaacaatttatcatgaaagaatacttgttttgcttttgcct 646
           ||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 246 atgtagaacaatttatcatgaaagaatacttgttttgtttttgcct 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 646
Length of database: 1046
Length adjustment: 10
Effective length of query: 636
Effective length of database: 1036
Effective search space:   658896
Effective search space used:   658896
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)