Query= MSMg01no456_h12.b1 MSMg01no456_h12.b1 CHROMAT_FILE:
MSMg01no456_h12.b1 PHD_FILE: MSMg01no456_h12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:28:18 2005
(294 letters)
>mm_chr4_27436125_27436818
Length = 694
Score = 561 bits (290), Expect = e-164
Identities = 290/290 (100%)
Strand = Plus / Plus
Query: 1 aagcagatctgataggataatgtttattttttcaggtagaaacagtgaacatttggaaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aagcagatctgataggataatgtttattttttcaggtagaaacagtgaacatttggaaga 260
Query: 61 gatatttagtgaaaatgtacattttcataatatgccaatgaccctggacatgagttattt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gatatttagtgaaaatgtacattttcataatatgccaatgaccctggacatgagttattt 320
Query: 121 tgaaaaatatttcagtaaacaaaatttgtaatgtgtaatgacatatgtttctctctttaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgaaaaatatttcagtaaacaaaatttgtaatgtgtaatgacatatgtttctctctttaa 380
Query: 181 cctaagcactataagcattaataaacttttttcagtgtgaagtgagtttaacttttttgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cctaagcactataagcattaataaacttttttcagtgtgaagtgagtttaacttttttgt 440
Query: 241 ctaatatgagaagtcaccaaatattactgaggtaatattttaagggatta 290
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctaatatgagaagtcaccaaatattactgaggtaatattttaagggatta 490
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 294
Length of database: 694
Length adjustment: 9
Effective length of query: 285
Effective length of database: 685
Effective search space: 195225
Effective search space used: 195225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no456_h12.g1 MSMg01no456_h12.g1 CHROMAT_FILE:
MSMg01no456_h12.g1 PHD_FILE: MSMg01no456_h12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:28:18 2005
(287 letters)
>mm_chr4_27562613_27563299
Length = 687
Score = 497 bits (257), Expect = e-145
Identities = 280/289 (96%), Gaps = 4/289 (1%)
Strand = Plus / Minus
Query: 1 tcctctctgggccatataatctaggcacaaccatttaatgaataagttcaacaggagcac 60
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 487 tcctctctgggccatataatctaggcacaaccatttaatgaaaaagttcaacaggagcac 428
Query: 61 tggggactaaaggcgtgcctttgaagaagcatatgcaactgtgtgattgaatttttcttt 120
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 tggggactaaaggcatgcctttgaagaagcatatgcaactgtgtgattgaatttttcttt 368
Query: 121 acttgttaacatccacacttaggttctcaaaaccataaatcaggtcctcaaatgtccttc 180
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 367 acttgttaacatccacacttagtttctcaaaaccataaatcaggtcctcaaatgtccttc 308
Query: 181 aaaatgttggatgaaagggatgaaagcaatactttatttccaaccgcaattcacagtt-- 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 aaaatgttggatgaaagggatgaaagcaatactttatttccaaccgcaattcacagttag 248
Query: 239 attctgttaaatatagggtttgtggtcagtcaaacttttgattttatgg 287
|| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 at--ggtaaaatatagggtttgtggtcagtcaaacttttgattttatgg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 687
Length adjustment: 9
Effective length of query: 278
Effective length of database: 678
Effective search space: 188484
Effective search space used: 188484
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
