Query= MSMg01no456_k19.b1 MSMg01no456_k19.b1 CHROMAT_FILE:
MSMg01no456_k19.b1 PHD_FILE: MSMg01no456_k19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:28:34 2005
(145 letters)
>mm_chr4_123600433_123600978
Length = 546
Score = 242 bits (125), Expect = 8e-69
Identities = 140/145 (96%), Gaps = 1/145 (0%)
Strand = Plus / Plus
Query: 2 cggaatta-atgtttacaccactgtggctggcaggaattgaccctttgaggtgacatttt 60
|||||||| |||||||||||||||||||||||||||| ||| ||||||||||||||||
Sbjct: 202 cggaattacatgtttacaccactgtggctggcaggaaaggactttttgaggtgacatttt 261
Query: 61 agtagaaatgtgaataatatttaataaatagcacgttactctgctgagtgtggtgacaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 agtagaaatgtgaataatatttaataaatagcacgttactctgctgagtgtggtgacaaa 321
Query: 121 atcctgtaatcgtagcttccctcag 145
|||||||||||||||||||||||||
Sbjct: 322 atcctgtaatcgtagcttccctcag 346
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 145
Length of database: 546
Length adjustment: 8
Effective length of query: 137
Effective length of database: 538
Effective search space: 73706
Effective search space used: 73706
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no456_k19.g1 MSMg01no456_k19.g1 CHROMAT_FILE:
MSMg01no456_k19.g1 PHD_FILE: MSMg01no456_k19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:28:34 2005
(242 letters)
>mm_chr4_123765067_123765708
Length = 642
Score = 453 bits (234), Expect = e-132
Identities = 240/242 (99%)
Strand = Plus / Minus
Query: 1 tcagtggtgagcaaaagagcagtgtgcgcacggtacctcaaaatgaactgttaggaaggg 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 442 tcagtggtgagcaaaagagcagtgtgcgcacggtacctcaaaatgaagtgttaggaaggg 383
Query: 61 ctcccagtgggactcaccatgagtcttaccataccaggtaccaaatgacgaggacttagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 ctcccagtgggactcaccatgagtcttaccataccaggtaccaaatgacgaggacttagg 323
Query: 121 aaaaccccttgtgaagtctctgcatgtctgtagaggcaagggactcctatgggggtagga 180
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 322 aaaaccccttgtgaagtctctgcaagtctgtagaggcaagggactcctatgggggtagga 263
Query: 181 aggacaccaactgggaagtcatctgttcctttttatgcatgcattgatttatttaataag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 aggacaccaactgggaagtcatctgttcctttttatgcatgcattgatttatttaataag 203
Query: 241 ta 242
||
Sbjct: 202 ta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 242
Length of database: 642
Length adjustment: 9
Effective length of query: 233
Effective length of database: 633
Effective search space: 147489
Effective search space used: 147489
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
