Query= MSMg01no461_c14.b1 MSMg01no461_c14.b1 CHROMAT_FILE:
MSMg01no461_c14.b1 PHD_FILE: MSMg01no461_c14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:34:39 2005
(499 letters)
>mm_chr4_137821501_137822399
Length = 899
Score = 787 bits (407), Expect = 0.0
Identities = 424/433 (97%), Gaps = 8/433 (1%)
Strand = Plus / Minus
Query: 71 cactacctctttaatctctctggcttcagactggcctcaattttgtattgtttggtttgg 130
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 899 cactacctctttaatctctctggcttcagactggcctcaattttgtattgtttggtttgg 840
Query: 131 tttcaagatagggtttctctgtgttacccctggctgtcctagaactcctgctgtagacca 190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 839 tttcaagatagggtttctctgtgttacccctggctgtcctagaactcctgctgtagacca 780
Query: 191 ggctgacctcgaactctgagatccccctgcccctgcctccctctgcaggaact---gttt 247
||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 779 ggctgacctcgaactctgagatccccctgcccctgcctccctctgcaggaactgaag--- 723
Query: 248 tg-ttgcgccaccactgccaggctacagacttcaaagtcttgatataattaaggaacata 306
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 -gcatgcgccaccactgccaggctacagacttcaaagtcttgatataattaaggaacata 664
Query: 307 aaatactaagagttgttatcatgcatgtaattgttttatgaaatgttataattatactgc 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 aaatactaagagttgttatcatgcatgtaattgttttatgaaatgttataattatactgc 604
Query: 367 attataatcagttttagtttgttcctttcagtttttaaaacgccatcactgggggcgggg 426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 attataatcagttttagtttgttcctttcagtttttaaaacgccatcactgggggcgggg 544
Query: 427 ggctaaaattattaatgtagctcaaagtctatgatacaaaacagctttatttatttattt 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 ggctaaaattattaatgtagctcaaagtctatgatacaaaacagctttatttatttattt 484
Query: 487 gaatttaacttaa 499
|||||||||||||
Sbjct: 483 gaatttaacttaa 471
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 499
Length of database: 899
Length adjustment: 10
Effective length of query: 489
Effective length of database: 889
Effective search space: 434721
Effective search space used: 434721
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no461_c14.g1 MSMg01no461_c14.g1 CHROMAT_FILE:
MSMg01no461_c14.g1 PHD_FILE: MSMg01no461_c14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:34:39 2005
(241 letters)
>mm_chr4_137630631_137631271
Length = 641
Score = 466 bits (241), Expect = e-136
Identities = 241/241 (100%)
Strand = Plus / Plus
Query: 1 aagtcctctgaaaaagagtagtggctctccagccctgtcattttttacacagtggattga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aagtcctctgaaaaagagtagtggctctccagccctgtcattttttacacagtggattga 260
Query: 61 ttttgtgcactgtattttaagcttcaccaccactacatgggattatttctggaatacggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttttgtgcactgtattttaagcttcaccaccactacatgggattatttctggaatacggg 320
Query: 121 aatgactcaatattgaaaactgatcatggcagcatgtcccacgagcataaagagtgacag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aatgactcaatattgaaaactgatcatggcagcatgtcccacgagcataaagagtgacag 380
Query: 181 acagtgatcagttcagctgacacagaaacacttccaagcgcccagtgccctgttctgaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acagtgatcagttcagctgacacagaaacacttccaagcgcccagtgccctgttctgaca 440
Query: 241 g 241
|
Sbjct: 441 g 441
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 241
Length of database: 641
Length adjustment: 9
Effective length of query: 232
Effective length of database: 632
Effective search space: 146624
Effective search space used: 146624
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
