Query= MSMg01no468_a08.b1 MSMg01no468_a08.b1 CHROMAT_FILE:
MSMg01no468_a08.b1 PHD_FILE: MSMg01no468_a08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:44:04 2005
(450 letters)
>mm_chr4_14955351_14956200
Length = 850
Score = 862 bits (446), Expect = 0.0
Identities = 449/450 (99%)
Strand = Plus / Minus
Query: 1 acaaagcactgaatcgtttatagagcttgggagatactttgtagataaatcttacatatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 650 acaaagcactgaatcgtttatagagcttgggagatactttgtagataaatcttacatatt 591
Query: 61 tgacaggtagaaagcagcaaggaccgtgccctgctgcagtttcatgctacatttttaggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 tgacaggtagaaagcagcaaggaccgtgccctgctgcagtttcatgctacatttttaggt 531
Query: 121 ttgtcattcctctcatcatctttgtagggcctcctccagtgggtctttaggaaagcattc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 ttgtcattcctctcatcatctttgtagggcctcctccagtgggtctttaggaaagcattc 471
Query: 181 actacactcccacaactgcttgtccagaaattctaaatatagaagggtttgatttgttgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 actacactcccacaactgcttgtccagaaattctaaatatagaagggtttgatttgttgc 411
Query: 241 tgcttgataaacacaggcttcaagaccatctccaaggaagcaaaacctatattaatgtag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 tgcttgataaacacaggcttcaagaccatctccaaggaagcaaaacctatattaatgtag 351
Query: 301 agagttttagtggggaaaatatcaattttgttgtcacagtttaagtctacatattttgta 360
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 350 agagttttagtggggaaaatatcaattttgttgtcacagtttaagcctacatattttgta 291
Query: 361 ttgtagaacacccgctatgcttttggtgttacctctgtagtattctgaactttggcatac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 ttgtagaacacccgctatgcttttggtgttacctctgtagtattctgaactttggcatac 231
Query: 421 attagccccagcaggttcttttttaatgct 450
||||||||||||||||||||||||||||||
Sbjct: 230 attagccccagcaggttcttttttaatgct 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 450
Length of database: 850
Length adjustment: 10
Effective length of query: 440
Effective length of database: 840
Effective search space: 369600
Effective search space used: 369600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no468_a08.g1 MSMg01no468_a08.g1 CHROMAT_FILE:
MSMg01no468_a08.g1 PHD_FILE: MSMg01no468_a08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:44:04 2005
(422 letters)
>mm_chr4_14808816_14809635
Length = 820
Score = 774 bits (400), Expect = 0.0
Identities = 416/422 (98%), Gaps = 2/422 (0%)
Strand = Plus / Plus
Query: 1 agtgggcaggcattgccattgaagaggctcgtagaggagtgagtgaggcagtagagggcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agtgggcaggcattgccattgaagaggctcgtagaggagtgagtgaggcagtagagggcc 260
Query: 61 gagcagcccagcgaggcagtgccaatcgttagaatacagacatgtgtctcaaaaaggagt 120
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 261 gagcagcccagcgaggcagtgccaaccgttagaatacagacatgtgtctcaaaaaggagc 320
Query: 121 acagattaatgcactaggatgaattagcaaaacggagagactgtctggcgcagactagat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acagattaatgcactaggatgaattagcaaaacggagagactgtctggcgcagactagat 380
Query: 181 ggacgatgctgatgcttgtgatgggaaactgtaatctgatcacttgtgggtttgcagggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggacgatgctgatgcttgtgatgggaaactgtaatctgatcacttgtgggtttgcagggt 440
Query: 241 ggtaccacttcctttaaagtgttgcttgagcagctctatgtcctttgatccctccacttt 300
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggtgccacttcctttaaagtgttgcttgagcagctctatgtcctttgatccctccacttt 500
Query: 301 cactgtgtctcttttaggagtctccgttttccttcatactgttcagcctcccctgactct 360
| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 501 cgctgtgtctcttttaggagtct--gttttccttcatactgttcagcctcccctgactct 558
Query: 361 ttcctcttccttattcagtataccccgatctgatttttccgaagccttcactattaggtt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 ttcctcttccttattcagtataccccgatctgatttttccgaagccttcactattaggtt 618
Query: 421 ct 422
||
Sbjct: 619 ct 620
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 422
Length of database: 820
Length adjustment: 9
Effective length of query: 413
Effective length of database: 811
Effective search space: 334943
Effective search space used: 334943
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
