CTTCAATXXXXXXXXXXXXXXXXXXXXXXXXXTCACAAGAGGATCCGCGG
AATTCCACATTTCCCATCAATACTCCATCATACTTACTTAACTTTTTGAT
GGGTACAAAGCTAGTAAATATGACCAGATGACAGAAGAAAGCAACAAGAT
GCAATACCTGTAATGGTCTAAACAGGCCATTGGTGCTCAATGACATTTAG
AAAGCTATGCCCTCACTGGACAAAGAAAGATTGAGATACTTTATGTGAAG
AGCCTCTATACTATTAGATGAAAACAGGCACAATAATTGTAAAGAGAATA
GTCAATATTTATATATATATATATATATATATATATATTTACATATTCAT
ATATAAGCAATATATGAATATGTGCATATATAAAATATAAATATATATTT
ATATTATGAATTATATATATTATGTAATATATAAATAATATATAAATAAA
ATAATATATTATATATATTTTATATATAGATGTATCCCCCCAGTCTACCC
TTTTTCTTTTATTTCTCTCCTCCTCCCTCCCTTCTTTTTTCTCATTCTCA
CCCTTACTTTTTTTTTTTCCCTATCTCTTCTCCTTTTCCTTTTTTTTTTC
CCCCTTTCCTCTTACATAATCTCCCCCCTTCTTTCCTCTCCCTCCCCCTT
CTCCCTTTTTTCTCCTTTTCCTCTCTCCCCTTTCCTTTCCTTCCATCATC
ATATCCTTCCTCCTTTACTCCCCTTTTTCTTACTCTTTTACCCCCCCTTC
TTCTC

NCGATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTGGCAGTGTCTCAGAAAATTGGAT
ATAGTATTACCTGAGGACCCAGCTATACCACTCCTGGGCATATATCCAAA
AGATTCTTTAACATATAATAAGGACACATTCTCTACTATGTTCGTAGCAA
CCTTATTTATAATATCCAGAAACTGGAAAAAACCCAGATAGCCTACAACA
GACAAATGAATACAGAAAATGTACATTTCCACAGTGGAGTACTACTCAGC
TATTAAAAACAATGACTTGTGTCTTGGATATTCTGAGCTTTAGGGCTTAT
ATTCACTTATCGGTGAGAGCATACTATGTGTGTTATTTCGTGACTGGGTT
ACCTCACTAAGGGTGATATTTTCTAGTTCCATCCATTTGTCTACGATTTT
TTTTAAATAGCAGAGTAGTACTCTATTGTGTAAATTTATTACATTTTCTA
TATCCAATCCTCTTTTGGAGGGCATATGGTTTCTTTCCAGCTTTTGGCAA
CAATAAATAAGGCTTCTATGAACATAGTAAAGCATGTGTACATGATATAT
ATTGGAGAATCTTTTGAGTGTATGCTCTAGAATGGTATAACTGGATCCTC
AGGAAATACTCCGTCTGATTTTCCCTTGTAACCCCAGACCGATTTCCACA
GTGGGTGTACCACTTTACAACCTCCCCATTCCCCGAAGAATTGTTCCCTT
CTCTA

Query= MSMg01no469_k10.b1 MSMg01no469_k10.b1 CHROMAT_FILE:
MSMg01no469_k10.b1 PHD_FILE: MSMg01no469_k10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:46:18 2005
         (414 letters)



>mm_chr4_37775450_37776263
          Length = 814

 Score =  750 bits (388), Expect = 0.0
 Identities = 408/416 (98%), Gaps = 4/416 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   caatactccatcatacttacttaactttttgatgggtacaaagctagtaaatatgaccag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caatactccatcatacttacttaactttttgatgggtacaaagctagtaaatatgaccag 260

                                                                       
Query: 61  atgacagaagaaagcaacaagatgcaatacctgtaatggtctaaacaggccattggtgct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atgacagaagaaagcaacaagatgcaatacctgtaatggtctaaacaggccattggtgct 320

                                                                       
Query: 121 caatgacatttagaaagctatgccctcactggacaaagaaagattgagatactttatgtg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caatgacatttagaaagctatgccctcactggacaaagaaagattgagatactttatgtg 380

                                                                       
Query: 181 aagagcctctatactattagatgaaaacaggcacaataattgtaaagagaatagtcaata 240
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 381 aagagcctctatactattagatgaaaacaggcacgataattgtaaagagaatagtcaata 440

                                                                       
Query: 241 tttatatatatatatatatatatatatatatttacatattcatatataagcaatatatga 300
           ||||||||||||||||||| ||| |||||||  |||||||||||||||||||||||||||
Sbjct: 441 tttatatatatatatatatgtatgtatatat--acatattcatatataagcaatatatga 498

                                                                       
Query: 301 atatgtgcatatataaaatataaatatatatttatattatgaattatatatat--tatgt 358
           ||||||||||||||||||||||||||||||||||| |||||||||||||||||  |||||
Sbjct: 499 atatgtgcatatataaaatataaatatatatttatcttatgaattatatatatattatgt 558

                                                                   
Query: 359 aatatataaataatatataaataaaataatatattatatatattttatatatagat 414
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 aatatataaataatatataaataaaataatatattatatatattttatatatagat 614


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 414
Length of database: 814
Length adjustment: 9
Effective length of query: 405
Effective length of database: 805
Effective search space:   326025
Effective search space used:   326025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)