Query= MSMg01no469_l08.b1 MSMg01no469_l08.b1 CHROMAT_FILE:
MSMg01no469_l08.b1 PHD_FILE: MSMg01no469_l08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:46:23 2005
(129 letters)
>mm_chr4_148185968_148186495
Length = 528
Score = 219 bits (113), Expect = 7e-62
Identities = 125/129 (96%), Gaps = 1/129 (0%)
Strand = Plus / Plus
Query: 1 gaggcttctccaagcagggttagctggctgccggccggctttccctctcctctcagctgg 60
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gaggcttctccaagcagggg-agctggctgccggccggctttccctctcctctcagctgg 259
Query: 61 tgggctccactgcgcaatcgctctgtccgctcgctcgctgccaggcagccctgatgacag 120
|||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 260 tgggctccactgtgcaatcgctctgcccgctcgctcgctgccaggcagccctgatgacag 319
Query: 121 gcaggaggg 129
|||||||||
Sbjct: 320 gcaggaggg 328
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 129
Length of database: 528
Length adjustment: 8
Effective length of query: 121
Effective length of database: 520
Effective search space: 62920
Effective search space used: 62920
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no469_l08.g1 MSMg01no469_l08.g1 CHROMAT_FILE:
MSMg01no469_l08.g1 PHD_FILE: MSMg01no469_l08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:46:23 2005
(227 letters)
>mm_chr4_148371262_148371888
Length = 627
Score = 431 bits (223), Expect = e-125
Identities = 226/227 (99%)
Strand = Plus / Minus
Query: 1 caggaacaggaaagcgtgctgtacggacagggtaggcagtggttcgaggcaggctcgctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 caggaacaggaaagcgtgctgtacggacagggtaggcagtggttcgaggcaggctcgctg 329
Query: 61 tgctttaggaggattgctccctctgaggagtttggacttgttctgaagactttgggaatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 tgctttaggaggattgctccctctgaggagtttggacttgttctgaagactttgggaatc 269
Query: 121 atcagttttacacagatgggtgatgctttagtaggctcaacctgacggccatgtcaagaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 atcagttttacacagatgggtgatgctttagtaggctcaacctgacggccatgtcaagaa 209
Query: 181 tagaccgttgctggtgctcgccattaatcccagtgcttgggaggcag 227
||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 208 tagaccgttgctggtgcacgccattaatcccagtgcttgggaggcag 162
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 227
Length of database: 627
Length adjustment: 9
Effective length of query: 218
Effective length of database: 618
Effective search space: 134724
Effective search space used: 134724
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
