Query= MSMg01no470_h09.b1 MSMg01no470_h09.b1 CHROMAT_FILE:
MSMg01no470_h09.b1 PHD_FILE: MSMg01no470_h09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:47:23 2005
(234 letters)
>mm_chr4_111231632_111232264
Length = 633
Score = 422 bits (218), Expect = e-122
Identities = 230/234 (98%), Gaps = 1/234 (0%)
Strand = Plus / Minus
Query: 1 cattaattctttgtgaatttcatattctgtattttgatcatatatgtcctgcttctcttc 60
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 cattaattctttgggaatttcatattctgtattttgatcatatatgtcctgcttctcttc 374
Query: 61 ttaactccccccattccacccttatctctgtgtctccacttcaacttcacgttctcattt 120
||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||
Sbjct: 373 ttaactccccccattccacccttatctct-tttctccacttcaacttcacgttctcattt 315
Query: 121 tacatctgccatcttgtttgaaaatggggaaactaagttccaaataagaaactattgtga 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 314 tacatctgccatcttgtttgaaaatggggaaactaagttccaaataagaaactagtgtga 255
Query: 181 agatatctgtatctgaattgttaaaaggcattcctcccagcctgacaaggtaca 234
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 agatatctgtatctgaattgttaaaaggcattcctcccagcctgacaaggtaca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 234
Length of database: 633
Length adjustment: 9
Effective length of query: 225
Effective length of database: 624
Effective search space: 140400
Effective search space used: 140400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no470_h09.g1 MSMg01no470_h09.g1 CHROMAT_FILE:
MSMg01no470_h09.g1 PHD_FILE: MSMg01no470_h09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:47:23 2005
(242 letters)
>mm_chr4_111068542_111069183
Length = 642
Score = 460 bits (238), Expect = e-134
Identities = 241/242 (99%)
Strand = Plus / Plus
Query: 1 actaaaagcttctaatgccctagtccccatgctggtcagcggaaagaggaaataactaga 60
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 201 actaaaagcttctaatgccctagtccccatgctggtcagtggaaagaggaaataactaga 260
Query: 61 atacaggcttgctctcaagacgccctgactagcgggggcacagacgtgaaagttttgggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atacaggcttgctctcaagacgccctgactagcgggggcacagacgtgaaagttttgggt 320
Query: 121 agaaggctctacaggacacaatagtcatcagcatggagaagtaggccaacctaagcagcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agaaggctctacaggacacaatagtcatcagcatggagaagtaggccaacctaagcagcc 380
Query: 181 tgggaaggttcccagaaagagacaatggtgaaggtgaagcttgaagtgttagttagacaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgggaaggttcccagaaagagacaatggtgaaggtgaagcttgaagtgttagttagacaa 440
Query: 241 ag 242
||
Sbjct: 441 ag 442
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 242
Length of database: 642
Length adjustment: 9
Effective length of query: 233
Effective length of database: 633
Effective search space: 147489
Effective search space used: 147489
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
