Query= MSMg01no472_d11.b1 MSMg01no472_d11.b1 CHROMAT_FILE:
MSMg01no472_d11.b1 PHD_FILE: MSMg01no472_d11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:49:46 2005
(527 letters)
>mm_chr4_86025466_86026393
Length = 928
Score = 982 bits (508), Expect = 0.0
Identities = 524/530 (98%), Gaps = 3/530 (0%)
Strand = Plus / Plus
Query: 1 tggactgcatctgccctcactaaatcactcagggtcatagggtgcaggggccttcattct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tggactgcatctgccctcactaaatcactcagggtcatagggtgcaggggccttcattct 260
Query: 61 gttgaatttctaaggtctccctgggatctctcccc-cccccagccccacccctgtgaacc 119
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 261 gttgaatttctaaggtctccctgggatctctcccctcccccagccccacccctgtgaacc 320
Query: 120 aaaaagggaaagagactgagggagaactgggagaactctcaagggccacaacaaaggagc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaaaagggaaagagactgagggagaactgggagaactctcaagggccacaacaaaggagc 380
Query: 180 cacttaatgcttctcacctaaggccatgaccacttacagctaggagaaatactggaccta 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cacttaatgcttctcacctaaggccatgaccacttacagctaggagaaatactggaccta 440
Query: 240 tcctccagtattatttgtggaaaaaaaaataaaaaggttttggggatggccaccagtgtc 299
|||||||||| || |||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 441 tcctccagtagtacttgtggaaaaaaaaatgaaaaggttttggggatggccaccagtgtc 500
Query: 300 tgccacagttcctgaggaagaatcagaaaagaaagctgaacgcctcttgtcaaggccgcc 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgccacagttcctgaggaagaatcagaaaagaaagctgaacgcctcttgtcaaggccgcc 560
Query: 360 atggttccttagactagtcaccaaagctgatatgtgaatcactgtatccattgtcttttc 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atggttccttagactagtcaccaaagctgatatgtgaatcactgtatccattgtcttttc 620
Query: 420 ttgtaccaagcccagcaccacccccactacacacacacacacacacacacacaca--gaa 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 621 ttgtaccaagcccagcaccacccccactacacacacacacacacacacacacacacagaa 680
Query: 478 acttcaagaacatatcgtgtaaaagtacacctttagacaccccacttcaa 527
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 acttcaagaacatatcgtgtaaaagtacacctttagacaccccacttcaa 730
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 527
Length of database: 928
Length adjustment: 10
Effective length of query: 517
Effective length of database: 918
Effective search space: 474606
Effective search space used: 474606
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no472_d11.g1 MSMg01no472_d11.g1 CHROMAT_FILE:
MSMg01no472_d11.g1 PHD_FILE: MSMg01no472_d11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:49:46 2005
(172 letters)
>mm_chr4_86133177_86133748
Length = 572
Score = 333 bits (172), Expect = 4e-96
Identities = 172/172 (100%)
Strand = Plus / Minus
Query: 1 catcagagccttaatgctaatgtactagatagctctgaaagagattattgtagttgttag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 catcagagccttaatgctaatgtactagatagctctgaaagagattattgtagttgttag 313
Query: 61 ctttcttaactattaccaaacactctcttactaataattcttgcctgttgaagtggaggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 ctttcttaactattaccaaacactctcttactaataattcttgcctgttgaagtggaggg 253
Query: 121 tcgggtctatattggtctgtcttacttaaaggtggttaagttaaaggtagaa 172
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 tcgggtctatattggtctgtcttacttaaaggtggttaagttaaaggtagaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 172
Length of database: 572
Length adjustment: 8
Effective length of query: 164
Effective length of database: 564
Effective search space: 92496
Effective search space used: 92496
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
