CCCCCCTCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCTTTGTTTTGCTCTGAGCCCCATTTTTAATGGGGTTATTTG
ATTTTCTGTAGTCCACCTTCTTGAGTTTTATATATATTGGATATTAGTCC
CTTATCTGATTTAGGATAGGTAAAGATCCTTTCATAATCTGTTGGTGGCC
TTTTTGAATTATTGACGGTGTCTTTTGCCTTGCAGAAGCTTTGCAATTTT
ATGAGGTCCCATTTGTTGATTCTTGATCATACAGCACAAGCCATTGCAAG
GCTTTTCCCTACTTTCTTCTCTATATTTTTTAGTGCCTCTGGTTTTATGT
GGAGTTCCTTAATCCACTTAGTTTTGACCTTGGTACAAGGAGATAGGAAT
GGATCAATTCGCATTCTTCTACATGATGACCACCAGTTGTGCCAGCACCA
TTTGTTGAAAATGCTGTCTTTTTTCCAATGGATGGTTTCAGCTCCCTTGT
CAAAGATCAAGTGACCATAGGTGTGTGAGTTCATTTCTGGGTCTTCAAAT
CTATTCCATTGGTCTGCTTGTCTGTCATTCTACCAGTAACTTGCATTTTT
CTTTTTATTCCACAATTTGTCCTGTAGTACCGCTTTTATGTCTCGCTTTG
GTTAATTTCTCCCACCAGTTTTTTTTTTTTCCTTTGAGAAAAAGTATTTT
GTTTTCCCTCCCTTTTTGTTTATTCTCCAAGAATATTGTCTCTTTTCCCC
CTTCCCTCCCCCTTCAA

AGTGGAGCAATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCAGAATTTTTTCATCC
AGCAAAGGATTTGCATGAGTTTCTCTGTGGATGGATTATATATTTTCAAG
GTTCTTGTCAGGGTAATTCTAATGTCTTCTGTTTGCATAGTTATACAAAC
TTCTTACATTCTTATCTGTCTTATAGTCTATGCAGCTTCTAATATTTGCA
TTAGCCTCTAGATTAGCAGCATAGAATTTAGTTTTTAGTGTTATTTTCTT
AGATTTTTTTGGTTGTTGTCATTAATGTCTCACTTGTTAGTTCTTTTCTA
TTGCAATGACAAAATAACATGACAAAGAGAACATATTTTGAAAAAAACAA
AACAAAGCAAAACAACAACAGCAGCAGCAATAGTTTATTTGGGCTTATTA
TTTCAGAGGGTTAGATGCCATGATGACAGAGAAAAGGCACAGACTCCATC
AGGAGCAGCCGAAAGCTCACATCCTGATCTGAGAGCACACTGGGATAATG
CCAGTCTTTTGAAACCACAAAGCCTGCCGCTAGTGGAACATCTCCTCCAA
AAAGATCATACCTTCTAATATTTCCCAGTAGTACCACCAACTGATGATCA
TGTATTTCAAAGAAATACTCTAATGTTGTCCCACTCTCAATCAAGTACCA
CATTTCCCTTAATTGAAAGAATTTTGGTTTTGTTTTTATGGCTGGCGCAA
AAAATAAGTTTCTCTA

Query= MSMg01no473_o08.g1 MSMg01no473_o08.g1 CHROMAT_FILE:
MSMg01no473_o08.g1 PHD_FILE: MSMg01no473_o08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:52:09 2005
         (483 letters)



>mm_chr4_17728060_17728942
          Length = 883

 Score =  926 bits (479), Expect = 0.0
 Identities = 482/483 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   tcagaattttttcatccagcaaaggatttgcatgagtttctctgtggatggattatatat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 tcagaattttttcatccagcaaaggatttgcatgagtttctctgtggatggattatatat 479

                                                                       
Query: 61  tttcaaggttcttgtcagggtaattctaatgtcttctgtttgcatagttatacaaacttc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 tttcaaggttcttgtcagggtaattctaatgtcttctgtttgcatagttatacaaacttc 419

                                                                       
Query: 121 ttacattcttatctgtcttatagtctatgcagcttctaatatttgcattagcctctagat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 ttacattcttatctgtcttatagtctatgcagcttctaatatttgcattagcctctagat 359

                                                                       
Query: 181 tagcagcatagaatttagtttttagtgttattttcttagatttttttggttgttgtcatt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 tagcagcatagaatttagtttttagtgttattttcttagatttttttggttgttgtcatt 299

                                                                       
Query: 241 aatgtctcacttgttagttcttttctattgcaatgacaaaataacatgacaaagagaaca 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 aatgtctcacttgttagttcttttctattgcaatgacaaaataacatgacaaagagaaca 239

                                                                       
Query: 301 tattttgaaaaaaacaaaacaaagcaaaacaacaacagcagcagcaatagtttatttggg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 tattttgaaaaaaacaaaacaaagcaaaacaacaacagcagcagcaatagtttatttggg 179

                                                                       
Query: 361 cttattatttcagagggttagatgccatgatgacagagaaaaggcacagactccatcagg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 178 cttattatttcagagggttagatgccatgatgacagagaaaaggcacagactccatcagg 119

                                                                       
Query: 421 agcagccgaaagctcacatcctgatctgagagcacactgggataatgccagtcttttgaa 480
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 118 agcagccgaaagctcacatcctgatctgagaacacactgggataatgccagtcttttgaa 59

              
Query: 481 acc 483
           |||
Sbjct: 58  acc 56


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 483
Length of database: 883
Length adjustment: 10
Effective length of query: 473
Effective length of database: 873
Effective search space:   412929
Effective search space used:   412929
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)