Query= MSMg01no475_c11.b1 MSMg01no475_c11.b1 CHROMAT_FILE:
MSMg01no475_c11.b1 PHD_FILE: MSMg01no475_c11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:53:50 2005
(243 letters)
>mm_chr4_151287475_151288117
Length = 643
Score = 253 bits (131), Expect = 5e-72
Identities = 131/131 (100%)
Strand = Plus / Minus
Query: 113 tactatatattttaataccagagcctgtgggctatatattttatttactgtcttcccact 172
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 tactatatattttaataccagagcctgtgggctatatattttatttactgtcttcccact 384
Query: 173 gaatgtatgatagttaagacagagatttaaaacatctcctttgtccgatgcttttcctgc 232
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 gaatgtatgatagttaagacagagatttaaaacatctcctttgtccgatgcttttcctgc 324
Query: 233 agttcccagat 243
|||||||||||
Sbjct: 323 agttcccagat 313
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 243
Length of database: 643
Length adjustment: 9
Effective length of query: 234
Effective length of database: 634
Effective search space: 148356
Effective search space used: 148356
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no475_c11.g1 MSMg01no475_c11.g1 CHROMAT_FILE:
MSMg01no475_c11.g1 PHD_FILE: MSMg01no475_c11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:53:50 2005
(197 letters)
>mm_chr4_151107793_151108390
Length = 598
Score = 236 bits (122), Expect = 7e-67
Identities = 165/196 (84%), Gaps = 26/196 (13%)
Strand = Plus / Plus
Query: 1 ccttactttgaacggatacacacagggagtggccggccacttgcagaggagccaagacct 60
|||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 201 ccttactttgtacggatacacacagggagtggccggccagttgcagaggagccaagacct 260
Query: 61 cacagaatttctcactcagccttccaaaatgtcatccatctggttggttgacatctcccc 120
||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cacagaatttctcactcagccttccaaaatgtcatcca---------------------- 298
Query: 121 caaactcttatagatagatagatagatagatagatagatagatagatagatagatagata 180
|||| |||||||||||||||||||||||| ||||||| ||||||||||||||||||
Sbjct: 299 ----ctctgatagatagatagatagatagataggtagataggtagatagatagatagata 354
Query: 181 gatagatagatagata 196
||||||||||||||||
Sbjct: 355 gatagatagatagata 370
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 64
Number of extensions: 17
Number of successful extensions: 17
Number of sequences better than 10.0: 1
Number of HSP's gapped: 15
Number of HSP's successfully gapped: 1
Length of query: 197
Length of database: 598
Length adjustment: 8
Effective length of query: 189
Effective length of database: 590
Effective search space: 111510
Effective search space used: 111510
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
