Query= MSMg01no476_b05.b1 MSMg01no476_b05.b1 CHROMAT_FILE:
MSMg01no476_b05.b1 PHD_FILE: MSMg01no476_b05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:55:04 2005
(405 letters)
>mm_chr4_106918114_106918918
Length = 805
Score = 775 bits (401), Expect = 0.0
Identities = 404/405 (99%)
Strand = Plus / Plus
Query: 1 caattaaataaagactagttacgcttttcttcctgttttatgagttttatattttctgtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caattaaataaagactagttacgcttttcttcctgttttatgagttttatattttctgtt 260
Query: 61 attgctttctcttttatagtatacatcttgtttggcctctcttttttttggggggggggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 attgctttctcttttatagtatacatcttgtttggcctctcttttttttggggggggggt 320
Query: 121 tctctgtagccctggatgtactggaactcactctgtagagcaggctggcctcacactcag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tctctgtagccctggatgtactggaactcactctgtagagcaggctggcctcacactcag 380
Query: 181 atccacctacctctgcctgagtactaggattaaaggcgtgctgttggcttcattttatag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atccacctacctctgcctgagtactaggattaaaggcgtgctgttggcttcattttatag 440
Query: 241 gttgtatttattattcatctgaacggtaaactggtgggttggggaatgtggctcagagag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gttgtatttattattcatctgaacggtaaactggtgggttggggaatgtggctcagagag 500
Query: 301 aacactatcctagtattattaggtcctggattggatcttcagcatcacacacacaaaaaa 360
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 501 aacactatcctagtattattaggtcctggattggatcttcagtatcacacacacaaaaaa 560
Query: 361 tgaattaatgcaaaactgccttttaatcataaaaaagttcaggtg 405
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgaattaatgcaaaactgccttttaatcataaaaaagttcaggtg 605
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 405
Length of database: 805
Length adjustment: 9
Effective length of query: 396
Effective length of database: 796
Effective search space: 315216
Effective search space used: 315216
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no476_b05.g1 MSMg01no476_b05.g1 CHROMAT_FILE:
MSMg01no476_b05.g1 PHD_FILE: MSMg01no476_b05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:55:04 2005
(486 letters)
>mm_chr4_107077542_107078427
Length = 886
Score = 499 bits (258), Expect = e-145
Identities = 297/316 (93%), Gaps = 12/316 (3%)
Strand = Plus / Minus
Query: 1 tcaggttcagggacttcaaaacaatagtatctacagagaaattaaacccattgtcttttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 tcaggttcagggacttcaaaacaatagtatctacagagaaattaaacccattgtcttttc 263
Query: 61 ttattttaactgccttatccccaaaattctggaaaaaaaacaaaaacaaaccaccatcac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 ttattttaactgccttatccccaaaattctggaaaaaaaacaaaaacaaaccaccatcac 203
Query: 121 taccacctccaccaccaccaccaccaccaccacctccaccaccacctccaccaccaccac 180
|||||||||||||||||||||||||||||||||| ||||| ||||||||||| |||||||
Sbjct: 202 taccacctccaccaccaccaccaccaccaccaccaccacctccacctccacctccaccac 143
Query: 181 cacctccaccaccacctccaccaccacctccaccaccaccacc------tccaccaccac 234
||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 142 cacctccaccaccacctccaccaccacctccaccaccaccaccaccacctccaccaccac 83
Query: 235 ctccaccaccaccaccatcacctccaccaccaccacc---acctccacc---accaccac 288
||||||||||||| ||| |||| |||||||||||||| ||| ||||| ||||||||
Sbjct: 82 ctccaccaccacctccaccaccaccaccaccaccacctccaccaccacctccaccaccac 23
Query: 289 ctccaccaccaccacc 304
||||||||||||||||
Sbjct: 22 ctccaccaccaccacc 7
Score = 107 bits (55), Expect = 2e-27
Identities = 61/63 (96%)
Strand = Plus / Minus
Query: 122 accacctccaccaccaccaccaccaccaccacctccaccaccacctccaccaccaccacc 181
|||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 66 accaccaccaccaccaccacctccaccaccacctccaccaccacctccaccaccaccacc 7
Query: 182 acc 184
|||
Sbjct: 6 acc 4
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 268
Number of extensions: 26
Number of successful extensions: 26
Number of sequences better than 10.0: 1
Number of HSP's gapped: 24
Number of HSP's successfully gapped: 2
Length of query: 486
Length of database: 886
Length adjustment: 10
Effective length of query: 476
Effective length of database: 876
Effective search space: 416976
Effective search space used: 416976
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
