Query= MSMg01no478_l09.b1 MSMg01no478_l09.b1 CHROMAT_FILE:
MSMg01no478_l09.b1 PHD_FILE: MSMg01no478_l09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:58:29 2005
(407 letters)
>mm_chr4_6853433_6854239
Length = 807
Score = 725 bits (375), Expect = 0.0
Identities = 399/407 (98%)
Strand = Plus / Plus
Query: 1 caaaaacagactcctagaatccctaaattctgcggccctgtgctccattctctctcatgc 60
||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 201 caaaaacagactcctagaatcccgaaattctgcggtcctgtgctccattctctctcatgc 260
Query: 61 tcttgcctagaaaacaaaagtgtcttctagcataagtaagtcataatgtaagtaagtaag 120
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 261 tcttgcctagaaaacaaaagtgtcttctagcataagtaagtcataatgtaaggaagtaag 320
Query: 121 caacaagtgagtaatgggtaagaagttgacttttacagaacttaaaaatacatgtatttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caacaagtgagtaatgggtaagaagttgacttttacagaacttaaaaatacatgtatttt 380
Query: 181 ctggctaaatacttttggttaccatggaaggaggccaaaatacttaaagactccattttc 240
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctgactaaatacttttggttaccatggaaggaggccaaaatacttaaagactccattttc 440
Query: 241 ctttaagctcaaaggatttaccaggaagttaaaactaaaacaggtttccagaggtgggac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctttaagctcaaaggatttaccaggaagttaaaactaaaacaggtttccagaggtgggac 500
Query: 301 taacagtcacccagctacccttttctcgggtcactttgtcctttcctggtgatatctttg 360
||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 501 taacagtcaccgagctacccagttctcgggtcactttgtcctttcctggtgatatctttg 560
Query: 361 gcctatctttatgttagcagatagtttctttccctcactgctattat 407
|||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 561 gcctatctttatgttagcagatagtttcttcccctcactgctattat 607
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 407
Length of database: 807
Length adjustment: 9
Effective length of query: 398
Effective length of database: 798
Effective search space: 317604
Effective search space used: 317604
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no478_l09.g1 MSMg01no478_l09.g1 CHROMAT_FILE:
MSMg01no478_l09.g1 PHD_FILE: MSMg01no478_l09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:58:29 2005
(414 letters)
>mm_chr4_7011967_7012780
Length = 814
Score = 760 bits (393), Expect = 0.0
Identities = 408/413 (98%)
Strand = Plus / Minus
Query: 2 tcacggctctccacactatatgtagttcaactctggttgtttctggagaaaatctctacc 61
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcacggctctccacactacatgtagttcaactctggttgtttctggagaaaatctctacc 382
Query: 62 aaataccaaaatttggggaaaaaatggtttccatgaaagttgtgtcaatgaaactggggt 121
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 381 aaataccaaaatttggggaaaaaatggtttccatgaaagttgtgtcaaggaaactggggt 322
Query: 122 tgtgtagaaagctgctgaactccagcatcacctgaaaggacctgtgtgtctcacaggagt 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgtgtagaaagctgctgaactccagcatcacctgaaaggacctgtgtgtctcacaggagt 262
Query: 182 cagctgcatctggcagagagcactgggtatccacacattttatcatgcaaaagattcaca 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cagctgcatctggcagagagcactgggtatccacacattttatcatgcaaaagattcaca 202
Query: 242 gagattcaataaaaagcattatttttatttcttactaagggcatttgtaagtgaaactgg 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gagattcaataaaaagcattatttttatttcttactaagggcatttgtaagtgaaactgg 142
Query: 302 cttttccccctgcgagttcacaggggaaagcacacaatgaattctagcctaactcagtgg 361
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 cttttccccctgcaagttcacaggggaaagcacacaatgaattctagcctaactcagtgg 82
Query: 362 cactgccttggttcaagtaccagcaacatccaccactgtgttccaccacaggg 414
||||||||||||| ||| |||||||||||||||||||||||||||||||||||
Sbjct: 81 cactgccttggttgaagcaccagcaacatccaccactgtgttccaccacaggg 29
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 414
Length of database: 814
Length adjustment: 9
Effective length of query: 405
Effective length of database: 805
Effective search space: 326025
Effective search space used: 326025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
