Query= MSMg01no479_e18.b1 MSMg01no479_e18.b1 CHROMAT_FILE:
MSMg01no479_e18.b1 PHD_FILE: MSMg01no479_e18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:59:14 2005
(639 letters)
>mm_chr4_27320632_27321668
Length = 1037
Score = 1116 bits (577), Expect = 0.0
Identities = 617/631 (97%), Gaps = 2/631 (0%)
Strand = Plus / Plus
Query: 1 aatcacttattttattatcaagcaagaaatcagtgaaggtataattgtgtccaatcttca 60
||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 201 aatcatttattttattatcaaaaaagaaatcagtgaaggtataattgtgtccaatcttca 260
Query: 61 ctatggccacactgaatctccttctcccatgaataacatgtatttttaaaaactaactga 120
|||||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct: 261 ctatggccacactgcatctctttctcccatgaataacatgtatttttgaaaactaactga 320
Query: 121 cactatcatatatctataaatgatgggtccaataaagtatcagaaaaagtaatttgcaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cactatcatatatctataaatgatgggtccaataaagtatcagaaaaagtaatttgcaag 380
Query: 181 aaaacattaaatatcaaaatttgagatgtgaaggtgaatttagatagcaaaaattcaata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaaacattaaatatcaaaatttgagatgtgaaggtgaatttagatagcaaaaattcaata 440
Query: 241 tcagtgctgctttaattgtaagcattaacattttaacaacttcactctgaatatttgaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcagtgctgctttaattgtaagcattaacattttaacaacttcactctgaatatttgaaa 500
Query: 301 aagaaggacatatttcaaaaagtcatacaattttgcaaaatgctttttatgagatataaa 360
||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||
Sbjct: 501 aagaaggacatatttcaaaaattcatacaattttgcaaaatgctttttatgatatataaa 560
Query: 361 tggttccctcttagaacttgaaggatattaaaagataagactaaagaaaatatgcaaatg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tggttccctcttagaacttgaaggatattaaaagataagactaaagaaaatatgcaaatg 620
Query: 421 gtaaataaaatattcatatttatggtaagcttaatattttcttagtttcatattttagct 480
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 621 gtaaataaaatattcatatttatagtaagcttaatattttcttagtttcatattttagct 680
Query: 481 tttattttattcagtaaaattcatatgaacattataaattaaaaccattcaaaactccaa 540
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 681 tttattttattcagtaaaattcatatgaacattataaattaaaaccattcaagactccaa 740
Query: 541 tattttactgtgaaaatatgatgatatagacagaatgatcaaaataaaatacatatttta 600
|||||||||||||||||||||||||| |||| |||||||||| ||||||||||||||||
Sbjct: 741 tattttactgtgaaaatatgatgata--gacaaaatgatcaaagtaaaatacatatttta 798
Query: 601 aaagtccttggatgtataaatgcttttcctg 631
|||||||||||||||||||||||||||||||
Sbjct: 799 aaagtccttggatgtataaatgcttttcctg 829
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 639
Length of database: 1037
Length adjustment: 10
Effective length of query: 629
Effective length of database: 1027
Effective search space: 645983
Effective search space used: 645983
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no479_e18.g1 MSMg01no479_e18.g1 CHROMAT_FILE:
MSMg01no479_e18.g1 PHD_FILE: MSMg01no479_e18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:59:14 2005
(654 letters)
>mm_chr4_27457299_27458353
Length = 1055
Score = 1212 bits (627), Expect = 0.0
Identities = 648/655 (98%), Gaps = 1/655 (0%)
Strand = Plus / Minus
Query: 1 atatctctcacatcctgcagaagcacactggagccattcagggtaaaaaaggagaaatga 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 855 atatctctcacatcctgcagaagcacactggagccattcagggtaaaaagggagaaatga 796
Query: 61 cctgttaaataattttgtcctataagcaaatcaataaataatgagcttatcacattatta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 795 cctgttaaataattttgtcctataagcaaatcaataaataatgagcttatcacattatta 736
Query: 121 atagtgctactgtcaagagtagttgagaaccaatgtaatgtgttcaattttatatgagag 180
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735 atagtgctactgtcaggagtagttgagaaccaatgtaatgtgttcaattttatatgagag 676
Query: 181 gtcatttttatattttaaagtatagtaaattaacgttttacatattcacatatgcatatg 240
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 675 gtcatttttatattttaaagtatagtaaattaacattttacatattcacatatgcatatg 616
Query: 241 ttagacttccagcagacatggaacttttaatattattgtattttttgaaactagttgaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 ttagacttccagcagacatggaacttttaatattattgtattttttgaaactagttgaaa 556
Query: 301 aaagcataaggaaaaattgaaaaggcttctcaagaaaaatgataaaaaaggaaacaggca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 aaagcataaggaaaaattgaaaaggcttctcaagaaaaatgataaaaaaggaaacaggca 496
Query: 361 gtttttgcagatataaggatgtgttttgctttataaatatccttaagtaatgctcagcct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 gtttttgcagatataaggatgtgttttgctttataaatatccttaagtaatgctcagcct 436
Query: 421 ggaaagatgcaggtatggtgactagacataggttctgggaatctaaataattctctattt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 ggaaagatgcaggtatggtgactagacataggttctgggaatctaaataattctctattt 376
Query: 481 gcattataaatctggtcagttcttttagaagcacatttcaaataaatcgtagaattaatg 540
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 375 gcattataaatctggtcagttcttttagaagcacatttcaaataaatcatagaattaatg 316
Query: 541 tgctatatctacattgagaaatccaaatttttgagatacctctgacaactgagcaattga 600
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 tgctacatctacattgagaaatccaaatttttgagatacctctgacaactgagcaattga 256
Query: 601 aaaggtatgcataaattacagtgtaatggttcttggtaaaggtt-cctttggaat 654
|||| ||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 255 aaagttatgcataaattacagtgtaatggttcttggtaaaggtttcctttggaat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 654
Length of database: 1055
Length adjustment: 10
Effective length of query: 644
Effective length of database: 1045
Effective search space: 672980
Effective search space used: 672980
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
