XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTGTCA
TTTTGCTGGGTGGATTTATACAAACTCCTTCATGTCTTTGAGCTTCAGCT
TACCTTCATGTTGGGGACATAATAAGTGGGAATAGGAGAAGGATGAAGGA
TTTGAGAAGGTCATCTGAAGATGTCACAAATTCAGGTTTTATTATCAGTA
ATCATCTTAATTGTCTTGTTGTGCACAGATTTGTTACAGATATGCCCTTA
ATTAGTTTTGGCAAAACTAAGGAATTTAAAAACTATATTTGGCAGTTAGG
GCTTTTGTCATGATAAACAGTGCTGTGTTGTTTTAGGCACTGTCTTCATT
AGAGCAGCCACACCTATTTTATGAGGCACAGGAACATGCTCAATTCAAGT
AGATGCCTCCAAGTTCATAGTACTCAAGGCCTGAAATTGCTGGGGACTCA
CAATATCCATTATAAGGAACCCATTAGAAAGTCTTCCAAAGATTCATCCA
TTCCCTAATCTACTTAGCCATTTTCTTTCTGAAAATACCAATCTATAAAA
TTTAACAATATACTGTGCTTCTTAAATGGTCCCATGCCAATAGATGAGCT
TAATGAATATCCAAATAATATTAGAAATCAAAAGAAAATTGATACCTCCA
AACTCTGTCTAGTTAATATTATGGCATACAAATACCATTTAGCTCAAAGA
GAATCAATTCCACCTAACTGGTTTCTAGAA

CGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTTCCTTTCCAATTTGAATCCCTTTGA
TCTCCTTTTGTTGTCTAATTGCTGTAACTAGGACTTCAAGTACTATATTG
AATAGGTAGGAAAAGAATGAGCAGCCTTGTCTAGTCCCTGATTTTAGTGG
GATTGCTTCAAGTTTCTCTCCATTTAGTTTAATGTTGGCTTCTGGTTTGC
TGTATATTTCTTTTATTTTGTTTAGGTATAGACTTTGAATTCCTGATATT
TCCACAACTTTTATCATGAATGGGTGTTGGATATTTTCAAATGCTTTCTC
ACCATTTAATGAGATGATCAGTTTTTTTTTCTTTGAGTTTGTTTATATTG
TGGACTATGATCGTTTTGATGTGTTCTTGTATTCGATTTACAAGAATTTT
ATTGAGTATTTTTGCATTGATATTCATAAGGGAAATTGGTCTGAAGTTCT
CTTTCTTTGTTGGGTCTTTGTGTGGTTTAGGTGTCAGAGTAATTGTGATT
TAAATGATTTGGCTAGAGTACCTTCTATTTCTATTTTGTGGAATAGTTTG
TGCAGAACTGGAATTAGATCTTCTTTGAAGGTCTGATAGAATTCTGCACT
AAACCCATCTAGTCCTGGGTTGTTTGTTTGTTTGTTTGTTTGTTTGGTTG
TTTTTGGTTGGGAGACTATTAATGACAGTTTCTATTTCTTTAGGGGAGG

Query= MSMg01no482_h23.b1 MSMg01no482_h23.b1 CHROMAT_FILE:
MSMg01no482_h23.b1 PHD_FILE: MSMg01no482_h23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:03:25 2005
         (632 letters)



>mm_chr4_16342717_16343747
          Length = 1031

 Score = 1106 bits (572), Expect = 0.0
 Identities = 617/632 (97%), Gaps = 1/632 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   ggatttatacaaactccttcatgtctttgagcttcagcttaccttcatgttggggacata 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ggatttatacaaactccttcatgtctttgagcttcagcttaccttcatgttggggacata 260

                                                                       
Query: 61  ataagtgggaataggagaaggatgaaggatttgagaaggtcatctgaagatgtcacaaat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ataagtgggaataggagaaggatgaaggatttgagaaggtcatctgaagatgtcacaaat 320

                                                                       
Query: 121 tcaggttttattatcagtaatcatcttaattgtcttgttgtgcacagatttgttacagat 180
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcaggttttattatcagtgatcatcttaattgtcttgttgtgcacagatttgttacagat 380

                                                                       
Query: 181 atgcccttaattagttttggcaaaactaaggaatttaaaaactatatttggcagttaggg 240
           |||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 381 atgcccttaattggttttggcaaaactaaggagtttaaaaactatatttggcagttaggg 440

                                                                       
Query: 241 cttttgtcatgataaacagtgctgtgttgttttaggcactgtcttcattagagcagccac 300
           | |||||||||| ||||||||||||||||||||||| |||||||||||||||||| ||||
Sbjct: 441 cctttgtcatgagaaacagtgctgtgttgttttaggaactgtcttcattagagcaaccac 500

                                                                       
Query: 301 acctattttatgaggcacaggaacatgctcaattcaagtagatgcctccaagttcatagt 360
           |||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 501 accttttttatgaggcacaggaagatgctcaattcaagtagatgcctccaagttcatagt 560

                                                                       
Query: 361 actcaaggcctgaaattgctggggactcacaatatccattataaggaacccattagaaag 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||
Sbjct: 561 actcaaggcctgaaattgctggggactcacaatatccattataaggaacccat-ataaag 619

                                                                       
Query: 421 tcttccaaagattcatccattccctaatctacttagccattttctttctgaaaataccaa 480
           ||||||||||  ||||||||||||||||||||||| ||||||||||||| ||||||||||
Sbjct: 620 tcttccaaaggctcatccattccctaatctacttaaccattttctttctaaaaataccaa 679

                                                                       
Query: 481 tctataaaatttaacaatatactgtgcttcttaaatggtcccatgccaatagatgagctt 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 tctataaaatttaacaatatactgtgcttcttaaatggtcccatgccaatagatgagctt 739

                                                                       
Query: 541 aatgaatatccaaataatattagaaatcaaaagaaaattgatacctccaaactctgtcta 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 aatgaatatccaaataatattagaaatcaaaagaaaattgatacctccaaactctgtcta 799

                                           
Query: 601 gttaatattatggcatacaaataccatttagc 632
           ||||||||||||||||||||||||||||||||
Sbjct: 800 gttaatattatggcatacaaataccatttagc 831


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 632
Length of database: 1031
Length adjustment: 10
Effective length of query: 622
Effective length of database: 1021
Effective search space:   635062
Effective search space used:   635062
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)