AACTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGGCG
GAATTCCTGGTTTCCCCAAGACTTTTATCATGAATGGGTATTGAATTTTG
TCAAATGCTTTCTCAGCATCTAATGAGATGATCATGTGGTTTTTGTCTTG
GACTTACAGAAGCTGTTACATTCCAAAAGGTCCTATTTATTAATTTTTGA
CCTTAGTTCTTGAGCCGTTGGTATCCTGTTCAGGAAGCTGTCCCTAGTAA
CGACAAGGTCAAGGCTATTCCCTACTTTCTGTTCTATTAGGCTAAGTGTA
TCTGATTTTATATTGAAGTCTTTGATCCATTTGGATTTTTGCAGTGATAA
ATAAGAACCTATTTGCATTCTTCTACATGCAGACATCCAGTTAAACCTGC
ACCATTTGTTGAAGTGTCCATAAGTGTGTGGGTTTATTTCTGGGTCTTCA
ATTTGATTCCATTGCTCTACCTGCCTGATTCTATACCGATACCATGCAAT
TTTATTACTATTGCTCTGAGTTCAGCTTGAAATCAGGGATGGTGATACCT
CCAGAAGTTCCTTTATTGCTCAGAATTGTTCTAACTATCCTGGGTTTTTT
GGTTGGGAAACTTTTAATGACTGCTTCCATTTCCTCAGGGAACTATTCAG
ATAGTTTACTTGATCTTGATATAGCTTTGGTATTTGGTATCTGTCTAANA
CAATCATCCATTTCATTACATTTTCCAATTTTGTGAAGTACAGGCTTTTG
AAGTAAGAACN

CACGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXCTGATATGCTCCTGTATTGGGCAGA
CTCCAAGCAGCCACAGGTAGGCTAAAAGAACTGTATGAGTAACAACCCAT
CACCCAAGGGTTCTGGCTAACGCAAACATGACCCTCAACACTTGTTAGAG
CAGTGGTTCTCAACCTTCCTAATGCCAGGACTATTTATGGTAGTGATCCT
CAACCATAAAATCATTTTGTTGCTACCTCATAAGTGTGACTTCACTACCG
GGATGAGTTCTAGTGTAAATAACTGATGTGACCCTCTCGGGTCTCGACTT
ACAGGTTGAGAATCACTGCTTTAGAGAAAACAATCAAATCATGAAATTTA
ATTACTAGAAATACCAACAAACAGGAACCCATGTGCCACAAATAAGATGG
CTTGTGGAGGCTGACCCTGGGAAGGAACAGTCAGTAGCATTAGCAAAAGG
TTTCTAAAAAACAGTGCACATGGAATGAGCAGCTGTAAATTTCAATAAAG
AAAAAGAAATTATTAAAAGATATGAAGTGTTCTAGAACTTAAAATTATAC
TACTAGAGTGAAACATTTCACAGGCTGGGATGTCAGGTCAGGAAGAGAGC
ATGCCTACCATGGATGTGACTCTGGCTTCTGGTTCTCAGCACTGACTGCA
ACTATGTCAGCAAGCCAAACTACTACCATAAATATTCATTGAGAGTTAAC
AATGTGTTA

Query= MSMg01no490_n19.g1 MSMg01no490_n19.g1 CHROMAT_FILE:
MSMg01no490_n19.g1 PHD_FILE: MSMg01no490_n19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:14:34 2005
         (682 letters)



>mm_chr4_3810376_3811457
          Length = 1082

 Score = 1288 bits (666), Expect = 0.0
 Identities = 678/682 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   ctgatatgctcctgtattgggcagactccaagcagccacaggtaggctaaaagaactgta 60
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctgatatgctcctgtgttgggcagactccaagcagccacaggtaggctaaaagaactgta 260

                                                                       
Query: 61  tgagtaacaacccatcacccaagggttctggctaacgcaaacatgaccctcaacacttgt 120
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgagtaacaacccatcactcaagggttctggctaacgcaaacatgaccctcaacacttgt 320

                                                                       
Query: 121 tagagcagtggttctcaaccttcctaatgccaggactatttatggtagtgatcctcaacc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tagagcagtggttctcaaccttcctaatgccaggactatttatggtagtgatcctcaacc 380

                                                                       
Query: 181 ataaaatcattttgttgctacctcataagtgtgacttcactaccgggatgagttctagtg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ataaaatcattttgttgctacctcataagtgtgacttcactaccgggatgagttctagtg 440

                                                                       
Query: 241 taaataactgatgtgaccctctcgggtctcgacttacaggttgagaatcactgctttaga 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 taaataactgatgtgaccctctcgggtctcgacttacaggttgagaatcactgctttaga 500

                                                                       
Query: 301 gaaaacaatcaaatcatgaaatttaattactagaaataccaacaaacaggaacccatgtg 360
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 501 gaaaacaatcaaatcatgaaatttaattactagaaataccaagaaacaggaacccatgtg 560

                                                                       
Query: 361 ccacaaataagatggcttgtggaggctgaccctgggaaggaacagtcagtagcattagca 420
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 561 ccacaaataagatggcttgtggaggctgaccctgggaaggaacagtcagtagaattagca 620

                                                                       
Query: 421 aaaggtttctaaaaaacagtgcacatggaatgagcagctgtaaatttcaataaagaaaaa 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aaaggtttctaaaaaacagtgcacatggaatgagcagctgtaaatttcaataaagaaaaa 680

                                                                       
Query: 481 gaaattattaaaagatatgaagtgttctagaacttaaaattatactactagagtgaaaca 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gaaattattaaaagatatgaagtgttctagaacttaaaattatactactagagtgaaaca 740

                                                                       
Query: 541 tttcacaggctgggatgtcaggtcaggaagagagcatgcctaccatggatgtgactctgg 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tttcacaggctgggatgtcaggtcaggaagagagcatgcctaccatggatgtgactctgg 800

                                                                       
Query: 601 cttctggttctcagcactgactgcaactatgtcagcaagccaaactactaccataaatat 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 cttctggttctcagcactgactgcaactatgtcagcaagccaaactactaccataaatat 860

                                 
Query: 661 tcattgagagttaacaatgtgt 682
           ||||||||||||||||||||||
Sbjct: 861 tcattgagagttaacaatgtgt 882


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 682
Length of database: 1082
Length adjustment: 10
Effective length of query: 672
Effective length of database: 1072
Effective search space:   720384
Effective search space used:   720384
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)