NATCAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCTTTGTTCTCTTCTGAGCCCCATTTTTTATGGGGTTATTTGATT
TTCAGGAGTCCACCTTCTTGAGTTCTTTATATATGTTGGATATTAGTCCC
CTATCTGATTTAGGATAGGTAAAGATCCTTTCCCAATATGTTGGTGGCTT
TTTGTCTTATTGATGGTGTCTTTTGCCTTACAGAAGCTTTGCAATTTTAT
GAGGTCCCATTTGTCAATTCTTGATCTTACAGCACAAGCCATTGATGTTC
TATTCAGGAATTTTTCTCCTGTGCCCATATCTTTGAGGCTTTTCCCCACT
TTCTCCTCTATAACTTTCCCTGTCTCTGGCTTTATGTGGAGTTCCTTAAT
CCACTTAGAGTTGACCTTATTACAAGGAGATAGGAATGGATCAATTTGCA
TTCTTCTACACGATAACTGCCAGTTGTGCCAGCACCGTTTGTTGAAAATG
CTGTCTTTCTTCCACTGGATGGTTTTGGCTCCCTTGTCAAAGATCAAGTG
ACCATAGGTGTGTGGATTCCTTTCAGGGTCTTCAATTCAATTCCATTGGT
CTACTTGTAGGTCACTATACCAGTGGCATGCAGTTTTTTACACAATTGCT
CTGTAGTAAAGCTTTANGTCAGGCATGGTGATTCCACCAGAGGTTCTTTA
TCATTCAGACGAGTTTTTGCTATCCAGTTTT

ATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXCACATGACTTCTGCCTTTCTATTTA
AGTTTTGCTCTTCTCTGTTCACCAGTATTTAATGAGCTCTAACAAAGATT
ATATGTCTGTCTATTTGCTGCTAATCACTCAACCATCACTTATGCCAAGC
ATCTCAAGAAGTCACAAATTCATACATTTAACCACAATTCACGTCGAAGA
GAATGTTCTCTGATGAAGAATTACATGTGTCTTCATTAGAGCCTCTGTAT
AAATGCTGTGTTTGTTTAGTTTCAGATTTTCGTTGGATTTATGACAATGG
AAATGGAAGAAACTCTGATTCTTTTTCTGCTCATGAGACCATTTGCCTCC
TCCGAGTTTGCCTCATCTAGCCTTATTATGAGGGTTTATGACTAGTCTTA
TTGAAACTTGATATGGTCTGTTCAGTTGGAATCATTGTGAGGCTGGTGTT
TTCTGAAGGAAAACAGAGGAACAGTCAATCTTGGGGGTGAGGAGGAAGGA
TGGTGCACTGGAGTGTGTGTGTGGATGCTGCAGTGAAATATACTGTATGA
GAGAAGAATAAAGACNAACAATAGCACTTGTTTATGAGTATAAATATAAA
TATTGAAACTTAAATATGGCTGTCTTTTTTTTCTAGCTAAACAACAATTA
TGAATACTCTTCTAGGGTCTAGATAGACCAAAGTTAN

Query= MSMg01no493_p11.g1 MSMg01no493_p11.g1 CHROMAT_FILE:
MSMg01no493_p11.g1 PHD_FILE: MSMg01no493_p11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:18:41 2005
         (536 letters)



>mm_chr4_37791404_37792339
          Length = 936

 Score =  727 bits (376), Expect = 0.0
 Identities = 391/396 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   cacatgacttctgcctttctatttaagttttgctcttctctgttcaccagtatttaatga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 cacatgacttctgcctttctatttaagttttgctcttctctgttcaccagtatttaatga 337

                                                                       
Query: 61  gctctaacaaagattatatgtctgtctatttgctgctaatcactcaaccatcacttatgc 120
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 336 gctctaacaaagattatatgtctgtctatttgctgctaaccactcaaccatcacttatgc 277

                                                                       
Query: 121 caagcatctcaagaagtcacaaattcatacatttaaccacaattcacgtcgaagagaatg 180
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 caagcatctcaaaaagtcacaaattcatacatttaaccacaattcacgtcgaagagaatg 217

                                                                       
Query: 181 ttctctgatgaagaattacatgtgtcttcattagagcctctgtataaatgctgtgtttgt 240
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 ttctctgatgaagaatgacatgtgtcttcattagagcctctgtataaatgctgtgtttgt 157

                                                                       
Query: 241 ttagtttcagattttcgttggatttatgacaatggaaatggaagaaactctgattctttt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 ttagtttcagattttcgttggatttatgacaatggaaatggaagaaactctgattctttt 97

                                                                       
Query: 301 tctgctcatgagaccatttgcctcctccgagtttgcctcatctagccttattatgagggt 360
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96  tctgctcatgagaccctttgcctcctccgagtttgcctcatctagccttattatgagggt 37

                                               
Query: 361 ttatgactagtcttattgaaacttgatatggtctgt 396
           |||||||||||||||||||||||||||||| |||||
Sbjct: 36  ttatgactagtcttattgaaacttgatatgctctgt 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 536
Length of database: 936
Length adjustment: 10
Effective length of query: 526
Effective length of database: 926
Effective search space:   487076
Effective search space used:   487076
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)