GGGGGAGAAGATTCAAAAAAGTTGGGGGTCGGGGTATTACGACTTCTCTA
CTCCCTGAGAAGGAAGACGCCGGGAAATTAAAGGTGTCTTTCCTCTTTCA
TAGGGGGAAAAAAGAAGATTTTCTCTTAAACACGCTAATGCCACACTTCC
TATTAAAATGGGTGGGGGAAGAGAGGGAGGGGAAGTTCTCCCTTCCTAAA
AAACAGGACAGTATTAAAAAAGGTTGGGTGCGCCGATTTTTTTCTCCTCC
TATATCCTACAACATGTTAGTTGTAGAGGGGTATTGTTGTGAGCGGGTTT
AGTAAAAAAAAAAGTAGAAAATATCATAGGAGATGTGCATAAATGTTGTG
AGGGGGAAGAAGAAGATAATATAAGAACCNCTTTCTCCTCCTTAAACTAT
AGGTGCTATGGTTATAAATATAATATAAGGCGGCATCTTTTATTTTTTTT
TATATAAAAAGAACACTCGATAGCGCCCCCCCCGATAAAACACGTCGATG
ATTGTTGAATTTGCGTGTGCCGCGGGGTAGATGGTACTTTATCACATACA
CCAACGAGGGGAGTAGTTCCGATTTTTTTCTCAGAAAATATAACACACGC
GACCCGGGTAAGACGTTATATGTAAATATAGAAAAGATTACATCTTTTCT
CATTTTCCCTACATCTCACCCATTAAAAAATACAATATTTTATTATGTGT
TCCCTCTCTACCCTCGATCGCAACATTATTCGCGTCTCACTTATTAATAG
TAGTCTATTATACCTTTTTTTTTTATATCTTCTCATCGCCGGCATATTTA
TATATTGTATTAATCTTTCAGATGTTGTAAATGTGCTTTGTTTTTTTTGT
TTTTCTCTTTTTCTCTTATTGTTCTTAGACGTAGACAAGTACATGGTTAT
TTTTTATATTTTTGTTTGTTTTGCACCGTTAAGCTCCTATAACGTAGTTA
TCTCGTCAATCACTCCTCCAACATTTCTCATTTTTATATTTTTTTCTCTT
CTCCACCATACTATTCTTTATATATATTTACACTTCTTATAGTACACGAG
GAN

GATTTTTCAATTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAATTCATGTCTTGTGTA
TGATGTATGTGGTGGGAATGGGTAGTGCAGAATGGACACGGATGCCTTTA
TACTGTGTGACTCATATGAATCAAGTCTTTTTTATTCAGTAAGGGTCAGT
GTAGTCTGTAGATACTACCTTGTCACATAGACATTGACTGCACTTGGGGT
CAATTTGCATGAGTATTGGATGCATCAGGAAAGTTCTGAGATCTTTAAAA
GCTAAGCATCTGAAGCAGAAGCCAGTAACCTAGGAAGTAAATAAACTTGT
CACTACCCATGCAGTAAGCACTTATTAAGCACTGTGGTATACCAGACACT
GGAAAGCTCTGAGGAACTCTGCTTGCTATTATAAAGAGCTACAGACTTTA
TGGCAGTGTCTTCTCATACGTCTGTGCTCAGAAGCAGAATAGGACAAGAG
AGCACGTCCTGGGGACAAGGATGGCACAGAGGCTGCAGTGACATTTGTAT
ATATATTTTATATGCATATACACACATGTATAACATATAGATTTTTATTT
CAATTATGAAATAGAGTAGCTTTACTAATCAGAAAACAGCTGGATAGAGG
TAGATGTCTAGGTATCTGACTTGTCATGTCTGAATAGTGAACAGGTGGCA
GAACTTGCCTATCCCTCTCTTGTCTTCAGGAAGTCCACAAT

Query= MSMg01no496_e02.g1 MSMg01no496_e02.g1 CHROMAT_FILE:
MSMg01no496_e02.g1 PHD_FILE: MSMg01no496_e02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:21:32 2005
         (541 letters)



>mm_chr4_105551207_105552148
          Length = 942

 Score = 1002 bits (518), Expect = 0.0
 Identities = 536/542 (98%), Gaps = 1/542 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   aattcatgtcttgtgtatgatgtatgtggtgggaatgggtagtgcagaatggacacggat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 aattcatgtcttgtgtatgatgtatgtggtgggaatgggtagtgcagaatggacacggat 683

                                                                       
Query: 61  gcctttatactgtgtgactcatatgaatcaagtcttttttattcagtaagggtcagtgta 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 gcctttatactgtgtgactcatatgaatcaagtcttttttattcagtaagggtcagtgta 623

                                                                       
Query: 121 gtctgtagatactaccttgtcacatagacattgactgcacttggggtcaatttgcatgag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 gtctgtagatactaccttgtcacatagacattgactgcacttggggtcaatttgcatgag 563

                                                                       
Query: 181 tattggatgcatcaggaaagttctgagatctttaaaagctaagcatctgaagcagaagcc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 tattggatgcatcaggaaagttctgagatctttaaaagctaagcatctgaagcagaagcc 503

                                                                       
Query: 241 agt-aacctaggaagtaaataaacttgtcactacccatgcagtaagcacttattaagcac 299
           ||| |||||||||||||||||||||||||||||||||||||||||||| ||| |||||||
Sbjct: 502 agtaaacctaggaagtaaataaacttgtcactacccatgcagtaagcatttactaagcac 443

                                                                       
Query: 300 tgtggtataccagacactggaaagctctgaggaactctgcttgctattataaagagctac 359
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 442 tgtggtataccagacactggaaagctctgagcaactctgcttgctattataaagagctac 383

                                                                       
Query: 360 agactttatggcagtgtcttctcatacgtctgtgctcagaagcagaataggacaagagag 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 agactttatggcagtgtcttctcatacgtctgtgctcagaagcagaataggacaagagag 323

                                                                       
Query: 420 cacgtcctggggacaaggatggcacagaggctgcagtgacatttgtatatatattttata 479
           || ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 322 catgtcctggggacaaggatggcacagaggctgcagtgacatttgtatatatatattata 263

                                                                       
Query: 480 tgcatatacacacatgtataacatatagatttttatttcaattatgaaatagagtagctt 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 tgcatatacacacatgtataacatatagatttttatttcaattatgaaatagagtagctt 203

             
Query: 540 ta 541
           ||
Sbjct: 202 ta 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 541
Length of database: 942
Length adjustment: 10
Effective length of query: 531
Effective length of database: 932
Effective search space:   494892
Effective search space used:   494892
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)