NNTTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CTGGATTTCAACAATAATAGAAAGACTAAAAGCCTACACACTGATGGAAA
TTAAGTAACTCTCTACTCAATGATCTCTGAGTTAGAGAAAAAATAAATAA
ATAATGAAATTAAAGACTTTCTAGAATTCAATGAAAATGAAAGCAAAACA
TACCCAAATTTATGGGACACAATGCAATCAGTGCTAAGAGGACAGATCAT
AGCACTAAGTGCCTTTATAAAGAAATTAGGAAGTTTTCATACTAGCAACT
AAAAAGTATACCTGAAAGCTCTAGTATAAGAAGAAGATAAATGGAGGAGG
AGAAGAAGCAAGCATGCACACCAAAGCAGAGTAGAAGGGAGAAAATATTC
AAAATCAGTATTAAAATCAATCTAGAAAAAAGAAACAATCAACAAACCCA
AATGCTGGTTCTTTGAGAAGACCAACAAGACAGACAAACCCTTATCAAAA
TTAACCAAGAGACAGAGAAACAGTATACAAATGAAGCACACCAGTAAAGA
AAAGGGTGACATAACAACTGATACTGAGGAAATTCAAGGGAACATTAGGT
CTTACTTCAAAATCCTGTACTTCAGAAAATTGGAAAATCTTAATGAAATG
GATTATTTTCTAGACAGATGTCTCTTACCAAAGTTAAATGAAGATTGGCT
AAGCTATTTAAACAGCCTAATAACTTCTAAAGAAACAGAAGCCATCATTA
AGTCTCCAA

NNACGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXTTTTCCCGCGAAATTCAGTGTTTTCAAAGGAGATTTTG
ACTTGAGACTTGGTATTTTAATTTTCAGTATCAGAGATTCGACCCAGGAT
CTTTTTCTTGCTAGTCAGGAACTGTTTTAGTAAGTCATGTCACCAGATGC
TCAAATAAAACTTTACAAAAAACCTTGTGTTTCTATGACTTTTATTGTTC
TCTCAAATACCTCCTTTAGTCCATTAAATCCTTGCTCTGAGTGCAGAAAT
CAAACCACCTTAGCATTATTTTAGACCAGAGGGATGTCTTTCTTAGCCAT
CAGTATTAGGATTCCAAAGGTGTGATGTTTCTCTCAATCATTCCTGCGTT
CATTGTTTTGCCTTTCTAGGTCCTAAAACTAGGGGAAATAGCAGGGTAAC
TGTTGTCATTGACATCTTTCTCATAGATGTCTTCCTGGATTGTTTTAACA
AATATATAAGGTTAAAGGCACAATCTGTCAATTTCAGCACTGGTTTTATA
TATCTTGCTTTTATTATTTCAGTTACTGAAGACAAATTTCTGTAAATCTA
CAATACTAGCTAAAATAGAAATTGTCCATTGACTTTCTAATGACACAGTA
GCTAGCTAGTAAGAATTTTTATGAAAAGAANATTTTATTTTGATTTTTAA
GTATTTTTATGTGTGGGCATTTTGCCTTCATATAAGTTTTTGTATCTGAT
GTGTGC

Query= MSMg01no497_h12.g1 MSMg01no497_h12.g1 CHROMAT_FILE:
MSMg01no497_h12.g1 PHD_FILE: MSMg01no497_h12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:23:10 2005
         (648 letters)



>mm_chr4_79951112_79952159
          Length = 1048

 Score = 1094 bits (566), Expect = 0.0
 Identities = 622/641 (97%)
 Strand = Plus / Plus

                                                                       
Query: 1   tcagtgttttcaaaggagattttgacttgagacttggtattttaattttcagtatcagag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 201 tcagtgttttcaaaggagattttgacttgagacttggtattttaattttcagtattagag 260

                                                                       
Query: 61  attcgacccaggatctttttcttgctagtcaggaactgttttagtaagtcatgtcaccag 120
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 attggacccaggatctttttcttgctagtcaggaactgttttagtaagtcatgtcaccag 320

                                                                       
Query: 121 atgctcaaataaaactttacaaaaaaccttgtgtttctatgacttttattgttctctcaa 180
           ||| ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||
Sbjct: 321 atgttcaaataaaactttacagaaaaccttgtgtttctatgccttttattgttctctcaa 380

                                                                       
Query: 181 atacctcctttagtccattaaatccttgctctgagtgcagaaatcaaaccaccttagcat 240
           ||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atacctcctctattccattaaatccttgctctgagtgcagaaatcaaaccaccttagcat 440

                                                                       
Query: 241 tattttagaccagagggatgtctttcttagccatcagtattaggattccaaaggtgtgat 300
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tatcttagaccagagggatgtctttcttagccatcagtattaggattccaaaggtgtgat 500

                                                                       
Query: 301 gtttctctcaatcattcctgcgttcattgttttgcctttctaggtcctaaaactagggga 360
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 501 gtttctctcaatcattcctgcgttcattgttttgcctttctaagtcctaaaactagggga 560

                                                                       
Query: 361 aatagcagggtaactgttgtcattgacatctttctcatagatgtcttcctggattgtttt 420
           |||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 561 aatagcagggtaactgctgtcattgacatctttctcataaatgtcttcctggattgtttt 620

                                                                       
Query: 421 aacaaatatataaggttaaaggcacaatctgtcaatttcagcactggttttatatatctt 480
           ||||  |||||||||||||||||||||||||||||| | ||||||||||||||| |||||
Sbjct: 621 aacagttatataaggttaaaggcacaatctgtcaatctaagcactggttttataaatctt 680

                                                                       
Query: 481 gcttttattatttcagttactgaagacaaatttctgtaaatctacaatactagctaaaat 540
           |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||
Sbjct: 681 gcttttattatttcagttactgaagacaaatttctgtaaatctacattactggctaaaat 740

                                                                       
Query: 541 agaaattgtccattgactttctaatgacacagtagctagctagtaagaatttttatgaaa 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 agaaattgtccattgactttctaatgacacagtagctagctagtaagaatttttatgaaa 800

                                                    
Query: 601 agaanattttattttgatttttaagtatttttatgtgtggg 641
           |||| ||||||||||||||||||||||||||||||||||||
Sbjct: 801 agaaaattttattttgatttttaagtatttttatgtgtggg 841


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 648
Length of database: 1048
Length adjustment: 10
Effective length of query: 638
Effective length of database: 1038
Effective search space:   662244
Effective search space used:   662244
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)