GACTCACTATATCCAGAGGATCCGCGGAATTCTTTGTTATTTTCTGAGCC
CCATTTTTAATGGGGTTATTTGATTTTCTGGAGTCCACCTTCTTGAGTTC
TTTATATATGTTGGATATTAGTCCCCTATCTGATTTAGGATAGGTAAAGA
TCCTTTCCCAATCTGTTGGTGGTCTTTTTGTCTTACTGACGGTGTCTTTT
GCCTTGCAGAAACTTTGGAGTTTCATTAGGTCCCATTTGTCAATTCTCGA
TCTTACCCAACACCCATTCATGATAAAAGTTCTGGAAAGATCAGGAATTC
AAGGCCCATACCTAAACATGATAAAAGCAATCTACAGCAAACCAGTAGCC
AACATCAAAGTAAATGGAGAGAAGCTGGAAGCAATCCCACTAAAATCAGG
GACTAGACAAGGCTGCCCACTTTCTCCCTACCTTTTCAACATAGTACTTG
AAGTATTAGCCAGAGCAATTCGACAACAAAAGGAGATCAAGGGGATACAA
ATTGGAAAGGAGGAAGTCAAAATATGACTTTTTGCAGATGATATGATAGT
ACATATAAGTGACCCTAAAAATTCCACCAGAGAACTCCTAAACCTGATAA
ACAGCTTCGGTGAAGTAGCTGGATATAAAATTAACTCAAACAAGTCAATG
GCCTTTCTCTACACAAAGAATAAACAGGCTGAGAAAGAAATTAGGGAAN

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXATTATATAGACCAGGCCGGCCTTGAACTCACAGATATCTG
CCACTCTCCTGCCTACCTGGTGCTGGGATTGTGACACTACACCCAGCTAA
ATAGAAACACTAGACACCTTTTCTCCAGACAGCAGACACCTTTCAGCATC
CTGGATTTTCACATGTTGAGCTGAGCTTAGTCTGCCTTGGTTATTCCTTT
TAGGACACTGTAGTTAGTCTGTAGGCACTACAGAAGGAGACAAAATTATG
CAGATCAGATTATGACAGATATAGGCTGATCAAGTTGGCTCAGGCTCTTA
CAATGGAACACCAAATGCAGGGTGAGTAATAGCAGGCACACATCTGGAGT
ACAGATGTTCAAGGTCAAGGTGGTGGGAGACCTGGTGACTACTAGTTTGC
AAATGGCCATAGTTTCTTATTTTTCTATTATCACTGCGTGGGAGGAATAG
GGAGAGGATGTAGNNAGTGGGGAGTGNNNNNNNNNNNNNNNNNNNNNTNN
NNNNNNNNTNNNNNNNNNNNNNNTNNNNNTNNNNNNNNNNNTNNNNNNNN
NNNTTTTTTTTTTTTTTTTTTTTTTTNTTTTTTTTTTTTNNTTTTTTTTT
TTTTTTTTTTNTTTTTTTTTTTNNTTNNTTTTTTNTNTTTTTTTTTTTTT
TTNNTTTTTTTTTNTTTTTTTTTTT

Query= MSMg01no501_j04.g1 MSMg01no501_j04.g1 CHROMAT_FILE:
MSMg01no501_j04.g1 PHD_FILE: MSMg01no501_j04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:28:26 2005
         (465 letters)



>mm_chr4_31969818_31970683
          Length = 866

 Score =  870 bits (450), Expect = 0.0
 Identities = 462/468 (98%), Gaps = 5/468 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   attatatagaccaggccggccttgaactcacagatatctgccactctcctgcctacctgg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 754 attatatagaccaggccggccttgaactcacagatatctgccactctcctgcctacctgg 695

                                                                       
Query: 61  tgctgggattgtgacactacacccagctaaatagaaacactagacaccttttctccagac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 694 tgctgggattgtgacactacacccagctaaatagaaacactagacaccttttctccagac 635

                                                                       
Query: 121 agcagacacctttcagcatcctggattttcac---atgttgagctgagcttagtctgcct 177
           ||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||
Sbjct: 634 agcagacacctttcagcatcctggattttcacataatgttgagctgagcttagtctgcct 575

                                                                       
Query: 178 tggttattccttttaggacactgtagttagtctgtaggcactacagaaggagacaaaatt 237
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 tggttattccttttaggacactgtagttagtctgtaggcactacagaaggagacaaaatt 515

                                                                       
Query: 238 atgcagatcagattatgacagatataggctgatcaagttggctcaggctcttacaatgga 297
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 atgcagatcagataatgacagatataggctgatcaagttggctcaggctcttacaatgga 455

                                                                       
Query: 298 acaccaaatgcagggtgagtaatagcaggcacacatctggagtacagatgttcaaggtca 357
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 acaccaaatgcagggtgagtaatagcaggcacacatctggagtacagatgttcaaggtca 395

                                                                       
Query: 358 aggtggtgggagacctggtgactactagtttgcaaatggccatagtttcttatttttcta 417
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 aggtggtgggagacctggtgactactagtttgcaaatggccatagtttcttatttttcta 335

                                                           
Query: 418 ttatcactgcgtgggaggaatagggagaggatgtagnnagtggggagt 465
           ||||||||||||||||||||||||||||||||||||  ||||||||||
Sbjct: 334 ttatcactgcgtgggaggaatagggagaggatgtag--agtggggagt 289


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 465
Length of database: 866
Length adjustment: 10
Effective length of query: 455
Effective length of database: 856
Effective search space:   389480
Effective search space used:   389480
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)