CGACTCACTATTCGGAGAGGATCCGCGGAATTCCTTCATTATTCTGTTTT
GATCCTGAGTGGTACAGAGCCGGCGAGGACGTCAGATGATACACTTAGAC
CCTGTGTTTGACTTCAGAGTACAGGATTAGGGTGGGGAGCCTCCAGACAG
AGCAGAGAGGGCTTCTATGTAATCCCTGACCCAATTACTTCACTCTTAGG
ATTGTCAGACTGAATACATGAAAACACTGGAGTTTGAACCTCAGTGTCTT
AGTTAGGGTTTTACTGCTGTGAACAGATGCCCTAACCAAGGCAACTCTCA
TAAGGACATTTAATTGTTGCTGGCTTACAGCAATTGGTTCAGCAGTTCAG
TTCATTATCATCAAGGTAGGAGCATGGCAGTGTCCAGGCAGGCATGGTAC
AGGAGGTGCTGAGAGTTCGATATCTTCATCTGCAGGCTGCTAGGAGAAGA
CTGGCTTTCAGGTAGCTAGTATGAGCATCTTAAAGTCCTTGCCCACAGTG
ACACACCTCTTCTACAAGGCTATACTGCCTAATGGTGTCACACTCTGGGC
CAATCATATACAAACCATCACACTCAGTTTAAAGGGAAGTGCTTTTTCAG
GGTAGCACATGGACTCAATCTTTGTTTCTCTGATTTTGAATTTTTCTTTC
TGGCTCGTGTTTTGTCTGACAGCATCATTTACTCTTCTCACTACATTTAT
TCACCTATAAAAATAGAGTTAAAAGCCCACCTTGGCTGTGTGATTATAGT

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXTTGCCGGCGAGATACTAGCTCGGGATAACTTTGCT
TTTATTACTGTAGATGGTAATAAAGAGACGAGCACACGTATGGTGGTTCC
AGAGAGCTTACAGAGTGGAAGAAGGAAGTAGAGGAAATAATAACACAAAT
GATAATGATAAATAACCAAGTCTAATATGCAACAGATGGAGACAGGTATT
ATCAGGGATATAAATAGTGTTCCTTACAGGTCCCAGGGTAAAGTCAAAGC
TCTGTGACATGTCAATAAAGGTCACCCAGCTACCTTTACCTTCTCAGCTT
GTCTTGTTGCTACTTACCTGCTGTCCACTCACAGTGGACTCCTCCTCCTC
TGCGCATCTTTAGTTTCACTTTTGCTTTAAGAACTGGGATGCTCTTCTGT
GGTCTTTTCTGCCAGGGAGACTCACATTCCATTTTGGTCCAAGCGCAGTA
CCAGGTGCTTCGTAGAAGAATCCCAGAGTGTCTGTCTCTTCTGGGTATCT
TCAGAAAACAAATGTTTATGAAAGAAGCTCTCTCCCCCTCTCTTCCCTCC
CCTCCCCTCCCTCCTTCCCTCCTTTTCTCCCTCCCTCCCTTCCTCTATCC
TTCCTTCCCTCCCTCCATCTCTCCTTCACTTAGACAGGCTCTATATATAC
CAGCCTTAAACCCAAA

Query= MSMg01no502_b06.b1 MSMg01no502_b06.b1 CHROMAT_FILE:
MSMg01no502_b06.b1 PHD_FILE: MSMg01no502_b06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:29:01 2005
         (491 letters)



>mm_chr4_55890503_55891393
          Length = 891

 Score =  789 bits (408), Expect = 0.0
 Identities = 423/428 (98%)
 Strand = Plus / Minus

                                                                       
Query: 11  ggaattccttcattattctgttttgatcctgagtggtacagagccggcgaggacgtcaga 70
           ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 ggaattccttcaggattctgttttgatcctgagtggtacagagccggcgaggacgtcaga 369

                                                                       
Query: 71  tgatacacttagaccctgtgtttgacttcagagtacaggattagggtggggagcctccag 130
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 tgatacacttagaccctgtgtttgacttcagagtacaggattagggtggggagcctccag 309

                                                                       
Query: 131 acagagcagagagggcttctatgtaatccctgacccaattacttcactcttaggattgtc 190
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 acagagcagagagggcttctatgtaatccctgacccaattacttcactcttaggattgtc 249

                                                                       
Query: 191 agactgaatacatgaaaacactggagtttgaacctcagtgtcttagttagggttttactg 250
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 agactgaatacatgaaaacactggagtttgaacctcagtgtcttagttagggttttactg 189

                                                                       
Query: 251 ctgtgaacagatgccctaaccaaggcaactctcataaggacatttaattgttgctggctt 310
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ctgtgaacagatgccgtaaccaaggcaactctcataaggacatttaattgttgctggctt 129

                                                                       
Query: 311 acagcaattggttcagcagttcagttcattatcatcaaggtaggagcatggcagtgtcca 370
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 128 acagcaattggttcagcagttcagttcattatcatcaaagtaggagcatggcagtgtcca 69

                                                                       
Query: 371 ggcaggcatggtacaggaggtgctgagagttcgatatcttcatctgcaggctgctaggag 430
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 68  ggcaggcatggtacaggaggtgctgagagttcgatatctttatctgcaggctgctaggag 9

                   
Query: 431 aagactgg 438
           ||||||||
Sbjct: 8   aagactgg 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 491
Length of database: 891
Length adjustment: 10
Effective length of query: 481
Effective length of database: 881
Effective search space:   423761
Effective search space used:   423761
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no502_b06.g1 MSMg01no502_b06.g1 CHROMAT_FILE:
MSMg01no502_b06.g1 PHD_FILE: MSMg01no502_b06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:29:01 2005
         (648 letters)



>mm_chr4_55714828_55715875
          Length = 1048

 Score = 1253 bits (648), Expect = 0.0
 Identities = 648/648 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttgccggcgagatactagctcgggataactttgcttttattactgtagatggtaataaag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttgccggcgagatactagctcgggataactttgcttttattactgtagatggtaataaag 260

                                                                       
Query: 61  agacgagcacacgtatggtggttccagagagcttacagagtggaagaaggaagtagagga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agacgagcacacgtatggtggttccagagagcttacagagtggaagaaggaagtagagga 320

                                                                       
Query: 121 aataataacacaaatgataatgataaataaccaagtctaatatgcaacagatggagacag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aataataacacaaatgataatgataaataaccaagtctaatatgcaacagatggagacag 380

                                                                       
Query: 181 gtattatcagggatataaatagtgttccttacaggtcccagggtaaagtcaaagctctgt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtattatcagggatataaatagtgttccttacaggtcccagggtaaagtcaaagctctgt 440

                                                                       
Query: 241 gacatgtcaataaaggtcacccagctacctttaccttctcagcttgtcttgttgctactt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gacatgtcaataaaggtcacccagctacctttaccttctcagcttgtcttgttgctactt 500

                                                                       
Query: 301 acctgctgtccactcacagtggactcctcctcctctgcgcatctttagtttcacttttgc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 acctgctgtccactcacagtggactcctcctcctctgcgcatctttagtttcacttttgc 560

                                                                       
Query: 361 tttaagaactgggatgctcttctgtggtcttttctgccagggagactcacattccatttt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tttaagaactgggatgctcttctgtggtcttttctgccagggagactcacattccatttt 620

                                                                       
Query: 421 ggtccaagcgcagtaccaggtgcttcgtagaagaatcccagagtgtctgtctcttctggg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ggtccaagcgcagtaccaggtgcttcgtagaagaatcccagagtgtctgtctcttctggg 680

                                                                       
Query: 481 tatcttcagaaaacaaatgtttatgaaagaagctctctccccctctcttccctcccctcc 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tatcttcagaaaacaaatgtttatgaaagaagctctctccccctctcttccctcccctcc 740

                                                                       
Query: 541 cctccctccttccctccttttctccctccctcccttcctctatccttccttccctccctc 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 cctccctccttccctccttttctccctccctcccttcctctatccttccttccctccctc 800

                                                           
Query: 601 catctctccttcacttagacaggctctatatataccagccttaaaccc 648
           ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 catctctccttcacttagacaggctctatatataccagccttaaaccc 848


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 648
Length of database: 1048
Length adjustment: 10
Effective length of query: 638
Effective length of database: 1038
Effective search space:   662244
Effective search space used:   662244
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)