GACTCACTTATGCGAGAGGATCCGCGGAATTCAAGGTCTTTCCCTAAACA
TGATAAAAAGCAACCTACAGCAAACCAGTAGCCAACATCAAAATAAATGG
TGAGAAGCTGGAAGCAATCTCACTAAAATCAGGGACTAGAAAACGCTGTC
CACTCTCTCCCTACCTATTCAACATTGTACTTGAAGTCCTTGAAAGAGCA
ATTCGACAACAAAAGAAGATCAAGGGCTACAAATTGGAAAGGAAGAAGTC
AAAATATCACTTTTTGCAGATGATATGATAGTATATATAAGTGACCCTAA
TAATTCCACCAGAGAACTCCTAAGCCTGATAAACAGCTTCAGTGAAGTAG
CTGGATATAAAATAAACTCAAACAAGTCAATGGTCTTTCTGTACACAAGG
ATAAACAGGCTGAGAAAGAAATTAGGTAAACAACAACCTTCTCAATAGTC
ACAAATAATATAAAATACCTTGGCATGACTAAGGAAGTGAAAAATCTGTA
TGATAAGAACTTCAAGTCTCTGAAGAAAGAAATTAAAGAAGATCTCAGAA
GATGGAAAGATATCCCATGCTCATGGATTGGCAGGATCAATATAGTAAAA
ATGGCTATCTTGCCAAAAGCAGTCTACAGATTCAATGCAATCCCCATCAA
AATTTCAACTAAATTCTTCAACAAATTAGAAAGGGCAATTGGCAGATTCA
TGTGGAATAACAATAAACCTAGGATAGCAAAAACTCTTCTCAAGA

AATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXGTTAGAAGACTGGGCAGATACCG
AGTTCTTTCTCTTCTCCTTGAAATGTTTAATTTGACATGCAAATGGAATA
TACTCTAGTTATAAAACATTTAGGAGCTCAATAAATGTTTTCTGAATGTA
TTTATGGAATGAACATGAAAGATGCAGAATTCATTACTTTGTGATTATAC
ATTTAGCAGTCAATATATGTTTACAAAGTGCTTCCCAATCTTACTTTTCA
TTTTAGAGTAAAAGAAATATTAATTAGATTAGCCTTATGTATATGCCTCT
TATCTGAATGCACAGTATCCCCATATTTTATCTCATTGTGATCTGGTTAA
CACCCTGTAGGCACCACTTTACAAACACACTGGTGAATGGTGTTTACTCC
CTACAGATCCTGCCTGTACCAAGCTCATCATGTGCTTCTGACTCTTATGA
ATCCATAATAATTCATCTAGAGAAACATTCATGAGAGACAAAGAGGTGCA
CCTATTTTTGGTTTCCACCATGCAGTATAGTAATCAGGTCTAATCGTTTA
CCATAAACCACCTTCGAATGCTTCCATTTGCTATCATTTATCAGTTAGAT
AATTCCTACTGAAAATTCAAAGATACAGCTTGAGATAAAAAAAAATAAGA
AGAGCAATATAGATATAAAAACTGTCTGTTATATTTGATTCCAGGAGTTT
TACATCCATTAGTCT

Query= MSMg01no502_d18.g1 MSMg01no502_d18.g1 CHROMAT_FILE:
MSMg01no502_d18.g1 PHD_FILE: MSMg01no502_d18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:29:13 2005
         (662 letters)



>mm_chr4_18098088_18099147
          Length = 1060

 Score = 1201 bits (621), Expect = 0.0
 Identities = 652/663 (98%), Gaps = 4/663 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   gttagaagactgggcagataccgagttctttctcttctccttgaaatgtttaatttgaca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 201 gttagaagactgggcagataccgagttctttctcttctccttgaaatgtttaatttgacg 260

                                                                       
Query: 61  tgcaaatggaatatactctagttataaaacatttaggagctcaataaatgttttctgaat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgcaaatggaatatactctagttataaaacatttaggagctcaataaatgttttctgaat 320

                                                                       
Query: 121 gtatttatggaatgaacatgaaagatgcagaattcattactttgtgattatacatttagc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtatttatggaatgaacatgaaagatgcagaattcattactttgtgattatacatttagc 380

                                                                       
Query: 181 agtcaatatatgtttacaaagtgcttcccaatcttacttttcattttagagtaaaagaaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agtcaatatatgtttacaaagtgcttcccaatcttacttttcattttagagtaaaagaaa 440

                                                                       
Query: 241 tattaattagattagccttatgtatatgcctcttatctgaatgcacagtatccccatatt 300
           ||  ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 441 tag-aattagattagccttatgtatatgcctcttatctgaatgtacagtatccccatatt 499

                                                                       
Query: 301 ttatctcattgtgatctggttaacaccctgtaggcaccactttacaaacacactggtgaa 360
           ||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||
Sbjct: 500 ttatctcattgtgatctggttaacaccctatatgcaccactttacaaacacactggtgaa 559

                                                                       
Query: 361 tggtgtttactccctacagatcctgcctgtaccaagctcatcatgtgcttctgactctta 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tggtgtttactccctacagatcctgcctgtaccaagctcatcatgtgcttctgactctta 619

                                                                       
Query: 421 tgaatccataataattcatctagagaaacattcatgagagacaaagaggtgcacctattt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 tgaatccataataattcatctagagaaacattcatgagagacaaagaggtgcacctattt 679

                                                                       
Query: 481 ttggtttcc-accatgcagtatagtaatcaggtctaatcgtttaccataaaccaccttcg 539
            |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 680 ctggtttcccaccatgcagtatagtaatcaggtctaatcatttaccataaaccaccttcg 739

                                                                       
Query: 540 aatgcttccatttgctatcatttatcagttagataattcctactgaaaattcaaagatac 599
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 aatgcttccatttgctatcatttatcagttagataattcctactgaaaattcaaagatac 799

                                                                       
Query: 600 agcttgagataaaaaaaaataagaagagcaatatagatataaaaactgtctgttatattt 659
           |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 agcttgagataaaaaaa--taagaagagcaatatagatataaaaactgtctgttatattt 857

              
Query: 660 gat 662
           |||
Sbjct: 858 gat 860


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 662
Length of database: 1060
Length adjustment: 10
Effective length of query: 652
Effective length of database: 1050
Effective search space:   684600
Effective search space used:   684600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)