XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTTTGC
CTAGCTCTGTATTTCATTTTTAATATGGTTATTTGGTTCTCTGGAGTCTA
ACTTCTTTGTATATATTGAACTTAACCCTCTATTAGATGTAGGGTTAGTA
TACATCTTTTTCTAATCTGTAGGTTGAAGTTTTGTACAGTTAACAGTGTT
CTTTGCCTTGTAGAAGATTTTCAATTGTATGAGATTCCATTTGTCTATGT
TGATTTTAGAGTACTTATAAGCCTGTGTTCTGTTTAGGAAAATTTCCCTG
TGCTGATATATTTGAGGTTCTTTCCCACATTCTCTTCTATCAGATTCAGT
GTATCTGGCTTTATGTGGAGGTCCTTGATCCACTTGGACTTAAGCTTTTA
CAAGGAGATAAGAATGTATCATTTTGCATTCTTCTACACATGAAGCACTG
CTTGAGCCAGCACCATTTGTTAAATATGCTATCTTTTTCCCCCCACTGGA
TGAAACAAAATCTTCTTTGTCAAAGATTCTACCTGCCTGTCAGTGTATGA
ATACCATGCTGCTTTTATCACTACTGCTCTGTAATATAGCTTGAGGTCAG
TGATAGTGGTTCCACAAAAAGTTCTCTTATTGTTGAGAACAGCTTTCACT
ATCTTGGGGATTTTGGTATTCCAGAATAATTTGAGAATTCCACTTTCTGT
CTCTGCTGATAATTGAGATAGAATTTGATGAGGAATG

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXAACGCACATCTTTTCTTGGACACATGTG
GCATACAACACAGGAAAGGACTTTGAAGAGGATTGACATCATTTTAATGA
GTGGGATCACATAAAAATGCCTTAGGTTCACAGATTTTATGGCAGGATCA
TGACAAAATAAATGTGACTGAAATCGATATGATGAAAGATTTCAAAGGGT
TGAGAAAATGATCAAATTCTATACAAAAAATTTAGATTCCATTTTACAAA
TTTTTATTAAGATACTTTGAAAACAGTAACATATATTTGACCTGTTAGTT
ATGTTGGGGACATTTCAGAGCACAAAGGGTTTAGGACCACAGAGTCCACC
AAGAGACAGTTTCAATATCCAGGTACAAAGCAAACAATCAGATAAACAAT
GAGGTGCATAGATATCTAGGAGTTGTTGTAAGGTGGAATAAGATTCTATA
GAATTTTAGCATCACAGTATATGGTATCCAGGATAACAGGAATAGAGGAA
GGAGCATCCTGTGAAGAGTTACACAGCTGCTGGGGTCACAGAGCCTTTAG
CTACTTTATTATAACTGATTGAAGACATTTCCTATCACCAGAGAGACAGG
CTGTAACTATAGTAACCCCATTTATTTTTATTGAAATGTATTTATATTGA
AGCTGATTCCAAAGGTTTTGTGACAATCCACAGTAACAAT

Query= MSMg01no502_f18.g1 MSMg01no502_f18.g1 CHROMAT_FILE:
MSMg01no502_f18.g1 PHD_FILE: MSMg01no502_f18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:29:22 2005
         (614 letters)



>mm_chr4_31045299_31046310
          Length = 1012

 Score = 1137 bits (588), Expect = 0.0
 Identities = 607/614 (98%), Gaps = 2/614 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   aacgcacatcttttcttggacacatgtggcatacaacacaggaaaggactttgaagagga 60
           |||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||
Sbjct: 812 aacgcacatcttttcttggacac--gtggcatacaacacaggaaaggactttgaagagga 755

                                                                       
Query: 61  ttgacatcattttaatgagtgggatcacataaaaatgccttaggttcacagattttatgg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 754 ttgacatcattttaatgagtgggatcacataaaaatgccttaggttcacagattttatgg 695

                                                                       
Query: 121 caggatcatgacaaaataaatgtgactgaaatcgatatgatgaaagatttcaaagggttg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 694 caggatcatgacaaaataaatgtgactgaaatcgatatgatgaaagatttcaaagggttg 635

                                                                       
Query: 181 agaaaatgatcaaattctatacaaaaaatttagattccattttacaaatttttattaaga 240
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 634 agaaaatgatcaaattctatacaaaaagtttagattccattttacaaatttttattaaga 575

                                                                       
Query: 241 tactttgaaaacagtaacatatatttgacctgttagttatgttggggacatttcagagca 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 tactttgaaaacagtaacatatatttgacctgttagttatgttggggacatttcagagca 515

                                                                       
Query: 301 caaagggtttaggaccacagagtccaccaagagacagtttcaatatccaggtacaaagca 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 caaagggtttaggaccacagagtccaccaagagacagtttcaatatccaggtacaaagca 455

                                                                       
Query: 361 aacaatcagataaacaatgaggtgcatagatatctaggagttgttgtaaggtggaataag 420
           |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||
Sbjct: 454 aacaatcagataaacaatgatgtggatagatatctaggagttgttgtaaggtggaataag 395

                                                                       
Query: 421 attctatagaattttagcatcacagtatatggtatccaggataacaggaatagaggaagg 480
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 394 attctatagaattttagcatcacagtatatggtatccaggataacaggaacagaggaagg 335

                                                                       
Query: 481 agcatcctgtgaagagttacacagctgctggggtcacagagcctttagctactttattat 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 agcatcctgtgaagagttacacagctgctggggtcacagagcctttagctactttattat 275

                                                                       
Query: 541 aactgattgaagacatttcctatcaccagagagacaggctgtaactatagtaaccccatt 600
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 274 aactgattgaagacatttcctatcaccagagagacagtctgtaactatagtaaccccatt 215

                         
Query: 601 tatttttattgaaa 614
           ||||||||||||||
Sbjct: 214 tatttttattgaaa 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 614
Length of database: 1012
Length adjustment: 10
Effective length of query: 604
Effective length of database: 1002
Effective search space:   605208
Effective search space used:   605208
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)