ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCAATAACTCTCTTAAAGAAATACAGGAGAACACTGCTAAAGAGTTACAA
GTCCTTAAAGAAAAACAGGAAAACACTGCTAAAGAGTTACAAGTCCTTAA
AGAAAAACAGGAAAACACAACCAAACAGGTAGAAGTTCTTATAGAAAAAC
AGGAAAACACATCCAAACAGGTGATGGAAATGAACAAAACCATACTAGAC
CTAAAAAGGGAAGTAGACACAATAAAGAAAACCCAAAGTGAGGCGACGCT
GGAGATAGAAACCCTAGGAAAGAAATCTGGAACCATAGATGCCAGCATCA
GCAACAGAATACAAGAGATGGAAGAGAGAATCTCAGGTGCAGAAGACTCC
ATAGAGAACATCGGCACAACAATCAAAGAAAATGGAAAATGCAAAAAGAT
CCTAACTCAAAACATCCAGGAAATCCAGGACACAATGAGAAGACCAAACC
TACGGATAATAGGAGTGGATGAGAATGAAGATTTTCAACTCAAAGGACCA
GCAAACATCTTCAACAAAATTATTGAAGAAAACTTCCCAAATCTAAAGAA
AGAGATGCCCATGAACATACAAGAAGCCTACAGAACTCCAAATAGACTGG
ACCAGAAAAGAAATTCCTCCCGACACATAATAATCAGAACACCAAATGCA
CTAAATAAAGATAGAATACTAAAAGCAGTAAGGGAAAAAAGGTCAGTAAC
ATN

ATTGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXACAGTTTAAAAACATAAATGTTTATT
TTTGGCGCCTTCCATTTAACATCATCAGACTTGTGGACATTTATAGATAA
TAATCACCACAGCAAGTAGAATTGTGGGAAATTTTGACCCTGTACCTTTG
GTGTACAATACCAAAGTAAAGGGTCCAACTGTGACCGAGGGATTTTTGGT
ATGCACATGTGTAGTACTGTGCTACCAACATCACATTGCACTGTGATGAA
CTTTTCTGAAGAGTAATAAATTTGCTTGTGTCTTTAATACACTAATCCAC
AGAGAACTGTGTCCACTCCTTTATGCTTGAGAGACATAACAAGAAGCAAC
TTTTCATAGCATAGAGTATAGTAGAGTTGAATGCACAATTGACTTAGTAC
TGAGAGACATAGACTTTAAATAGCAGGGTAGGTATTGTGAATGCCATCCT
GTTTCCATTTCCTCTGTAGAGTAAAGGTTGTAACAAATATGGATAAACCC
AACCTGTAAACTATGAAAACCTATCCCGAGGTCCATGTTGGTAACACCAT
ATAAAGGTAAAATGTCTCCTAGAAAAGGACCTTTAAAATTGCTCNAAAAG
TATTTTAATCATAAATACTATTTCAGCCAAGACTAATTCAATTCACAGAA
AACTGTATTTCAGATAAATATTCTCACTGTATTTACGTGACAAATAGTGG
ACCTTACTCCAGATGCTCC

Query= MSMg01no511_h21.g1 MSMg01no511_h21.g1 CHROMAT_FILE:
MSMg01no511_h21.g1 PHD_FILE: MSMg01no511_h21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:41:23 2005
         (520 letters)



>mm_chr4_76730473_76731394
          Length = 922

 Score =  878 bits (454), Expect = 0.0
 Identities = 505/522 (96%), Gaps = 2/522 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   acagtttaaaaacataaatgtttatttttggcgccttccatttaacatcatcagacttgt 60
           ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||
Sbjct: 722 acagtttaaaaacataaatgtttatttctggtgccttccatttaacatcatcagacttgt 663

                                                                       
Query: 61  ggacatttatagataataatcaccacagcaagtagaattgtgggaaattttgaccctgta 120
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 ggacatctatagataataatcaccacagcaagtagaattgtgggaaattttgaccctgta 603

                                                                       
Query: 121 cctttggtgtacaataccaaagtaaagggtccaactgtgaccgagggatttttggtatgc 180
           |||||||| ||||||||||||||||||||||||| ||||||| |||||||||||||||||
Sbjct: 602 cctttggtatacaataccaaagtaaagggtccaattgtgaccaagggatttttggtatgc 543

                                                                       
Query: 181 acatgtgtagtactgtgctaccaacatcacattgcactgtgatgaacttttctgaagagt 240
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 acgtgtgtagtactgtgctaccaacatcacattgcactgtgatgaacttttctgaagagt 483

                                                                       
Query: 241 aat-aaatttgcttgtgtctttaatacactaatccacagagaactgtgtccactccttta 299
           ||| ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 aataaaagttgcttgtgtcattaatacactaatccacagagaactgtgtccactccttta 423

                                                                       
Query: 300 tgcttgagagacataacaagaagcaacttttcatagcatagagtatagtagagttgaatg 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 tgcttgagagacataacaagaagcaacttttcatagcatagagtatagtagagttgaatg 363

                                                                       
Query: 360 cacaattgacttagtactgagagacatagactttaaatagcagggtaggtattgtgaatg 419
           ||||||||||||| ||||||||||||||| ||| ||||||||||||||| ||||||||||
Sbjct: 362 cacaattgacttaatactgagagacatagtcttcaaatagcagggtaggcattgtgaatg 303

                                                                       
Query: 420 ccatcctgtttccatttcctctgtagagtaaaggttgtaacaaatatggataaacccaac 479
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 302 ccatcctgtttccatttcctctgtagagtaaaggttgtaacaaatatgaataaacccaac 243

                                                     
Query: 480 ctgtaaactatgaaaacctatccc-gaggtccatgttggtaa 520
           |||||||||||||||||||| ||| |||||||||||||||||
Sbjct: 242 ctgtaaactatgaaaacctacccccgaggtccatgttggtaa 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 520
Length of database: 922
Length adjustment: 10
Effective length of query: 510
Effective length of database: 912
Effective search space:   465120
Effective search space used:   465120
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)