Query= MSMg01no511_k12.b1 MSMg01no511_k12.b1 CHROMAT_FILE:
MSMg01no511_k12.b1 PHD_FILE: MSMg01no511_k12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:41:35 2005
(167 letters)
>mm_chr4_69927763_69928329
Length = 567
Score = 308 bits (159), Expect = 2e-88
Identities = 165/167 (98%)
Strand = Plus / Minus
Query: 1 attgcagcaaaaggagacactgacaaagattagtatttgattttcagattctgaaatctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 attgcagcaaaaggagacactgacaaagattagtatttgattttcagattctgaaatctg 308
Query: 61 tccacctgatgaccttgccttattatcagcatgcaaagagaatcttgaagacctcctagg 120
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 307 tccacctgatgaccttgccttattaccagcatgcaaagagaatcttgaagacctcctagg 248
Query: 121 cccatcctccatagccacttacttggattccaagagtcagctctctg 167
|||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 247 cccatcctccatagccacttacctggattccaagagtcagctctctg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 167
Length of database: 567
Length adjustment: 8
Effective length of query: 159
Effective length of database: 559
Effective search space: 88881
Effective search space used: 88881
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no511_k12.g1 MSMg01no511_k12.g1 CHROMAT_FILE:
MSMg01no511_k12.g1 PHD_FILE: MSMg01no511_k12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:41:35 2005
(372 letters)
>mm_chr4_69806914_69807685
Length = 772
Score = 646 bits (334), Expect = 0.0
Identities = 362/372 (97%), Gaps = 3/372 (0%)
Strand = Plus / Plus
Query: 1 ttagctcctcctgcactatgcctgcatgaatgctgtcatgttcccaccttgataataatg 60
||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 200 ttagcccctcctgcactatgcctgcatgaatgctgccatgttcccaccttgataataatg 259
Query: 61 aactgaatatttgaacttgtaagcagccccaattaaatgttgtccttaa--tttttttaa 118
||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 260 gactgaatatttgaacctgtaagcagccccaattaaatgttgtccttaaattttttttaa 319
Query: 119 tatagttactttgaactagagggtgtattgtttaaaaaataaacagtttttaaaagtaag 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tatagttactttgaactagagggtgtattgtttaaaaaataaacagtttttaaaagtaag 379
Query: 179 aaaataaaaaaataataaaagagttgccttggtcatagtgtctagtacaacagtaaaacc 238
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 aaaat-aaaaaataataaaagagttgccttggtcatagtgtctagtacaacagtaaaacc 438
Query: 239 ctaactaaaaaatcagctaagtaacattgaacaagttacccacatctaaagactttcatt 298
|||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 439 ctaactaaaaaaccagctaagtaacattgaacaagttacccacatctatagactttcatt 498
Query: 299 tctcaatttataaaatggtacctgaaatttaagattctgaccatggttgttcttgaagtt 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 tctcaatttataaaatggtacctgaaatttaagattctgaccatggttgttcttgaagtt 558
Query: 359 aaataactaata 370
|||||| |||||
Sbjct: 559 aaataagtaata 570
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 372
Length of database: 772
Length adjustment: 9
Effective length of query: 363
Effective length of database: 763
Effective search space: 276969
Effective search space used: 276969
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
