Query= MSMg01no513_o10.b1 MSMg01no513_o10.b1 CHROMAT_FILE:
MSMg01no513_o10.b1 PHD_FILE: MSMg01no513_o10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:44:34 2005
(398 letters)
>mm_chr4_104142292_104143089
Length = 798
Score = 669 bits (346), Expect = 0.0
Identities = 382/394 (96%)
Strand = Plus / Plus
Query: 5 gaattctgctgtctcaatcacctagggagcatttagtccagtacctgggatgtacccaca 64
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctgctgtcagaatcacctagggagcatttagtccagtacctgggatgtacccaca 264
Query: 65 caaacccatcaaatgagagtaccagggtgaccatcagcatggaccaacctatactgcttg 124
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 265 caaacccatcaaatgagagtaccagggtgaccgtcagcatggaccaacctatactgcttg 324
Query: 125 caatgatagtgggagctgtcaggtgtactgtcttcttagaaacagttccttgtgtacagg 184
|| |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||
Sbjct: 325 cagtgatagtgggagctgtcaggtgtactctcttcttagaaacagtttcttgtgtacagg 384
Query: 185 agaaacaagtctgtggtaagaggaggtgtctccttgcaggagtgtttgaggtgaggtgtt 244
|||| || |||| |||||||| |||||||||||||||||||||||||||||||||| |||
Sbjct: 385 agaagcaggtctatggtaagatgaggtgtctccttgcaggagtgtttgaggtgaggcgtt 444
Query: 245 ttggatgttgaccagtgaatcacagaggagctttgctgggagcacaaacagccttcagtg 304
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 445 ttggatgttgaccagtgaatcagagaggagctttgctgggagcacaaacagccttcagtg 504
Query: 305 ttgctcagttgcttgggagttgccaagagtgattgtggtttgtgtgtgtgtgtgtttctg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ttgctcagttgcttgggagttgccaagagtgattgtggtttgtgtgtgtgtgtgtttctg 564
Query: 365 tgagatggttcaaataaacacacaaatcagggaa 398
||||||||||||||||||||||||||||||||||
Sbjct: 565 tgagatggttcaaataaacacacaaatcagggaa 598
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 398
Length of database: 798
Length adjustment: 9
Effective length of query: 389
Effective length of database: 789
Effective search space: 306921
Effective search space used: 306921
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no513_o10.g1 MSMg01no513_o10.g1 CHROMAT_FILE:
MSMg01no513_o10.g1 PHD_FILE: MSMg01no513_o10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:44:35 2005
(442 letters)
>mm_chr4_104295570_104296411
Length = 842
Score = 584 bits (302), Expect = e-171
Identities = 334/350 (95%), Gaps = 10/350 (2%)
Strand = Plus / Minus
Query: 1 atgttaggcaagcactctaacaatcatggagcctacaaatggcgaagctactgaagaaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 atgttaggcaagcactctaacaatcatggagcctacaaatggcgaagctactgaagaaga 291
Query: 61 gaaggtagtggcttctaaggacaaagcaggctaaaagaaatcgtggctcgcctttgagac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 gaaggtagtggcttctaaggacaaagcaggctaaaagaaatcgtggctcgcctttgagac 231
Query: 121 acagagaatatagttgatatcaatgctttggaaataatgtaagagacagaggataaggca 180
||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 acagagattatagtggatatcaatgctttggaaataatgtaagagacagaggataaggcg 171
Query: 181 aagtatacacacacacacac--------acacacacacaaaa--ttcgtcttctggactg 230
||||| |||||||||||||| |||||||||||||| || |||||||||||||
Sbjct: 170 aagtacacacacacacacacgcacacacacacacacacaaaaaattggtcttctggactg 111
Query: 231 gaactcacagtaattgtcatggcctaaaggaaattgagccagtcaatatgtcacagcagc 290
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 110 gaactcacagtaattgtcatggcctaaaggagattgagccagtcaatatgtcacagcagc 51
Query: 291 agtccacgaggccctacctcttaatggttgctgtggggatcacgttattt 340
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 50 agtccacgaggccctacctcttaatggttgctgtggggatcacgttattt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 442
Length of database: 842
Length adjustment: 9
Effective length of query: 433
Effective length of database: 833
Effective search space: 360689
Effective search space used: 360689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
