TTTTTTTTGATCCATATCTTTTTCCATTTTGNTNNTTTTTTCCTCGCTCC
TATAATTGCGGCCTCTAATACGATCCTATAGTCATAGTAGGCGCGGAATT
CTTTGTTCTTTCTCCGAGCCCCATTTTTTAAATGGGGTTTATTTTGATTT
TTCCGGAAGTCCACCCTTTCCTTGAAGATCCCTTTAAAAAAAAAATGGGG
AAAGGTTTAAATCCCCCCCCTAACCCCCAAAATTTTTGGGGAAAAATGGG
GTAAAAAAAAAACCCCCTTTTTCCCCCCAAAAAATCCTGGGTGTGGGGGG
GGGGGCCCCCCTTTTTTTTTGGGGCCTCCTATTATATGGAAAGGGGGGGG
GGGGCGCCCCTTTTTTTTGGGCTTTTTTTTGGCCAAAAAAAAAAAAACTT
TTTTTGTGGCAGCAAAACTTTTTTTTATTAAAAAAAAAAAGGGTCTCCCC
CCCCCTTTTTTTTTTATTAAAGAAGGAATATTCTCCCCCCCAAAATAATC
TTTTTTTTTTTTATAAAGAAACAACACACCCAACCCCACCCTTTCTTTTT
TTTGTGGTGGGTGTTCTCTTTTTCCCCATTTTTCTTGAGAGGAAAGAAAT
ATATTATTTTTTTTTTCTCCCCCCCCCCGCC

GCCCATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXTGTGTCCTGTATACCAAGCTTA
ATTGCCTAATAAATGCTAAATGATAAAAATAAAGTACTCTTAAAATTAGG
TATATTGTCAAGTATTTTTGGAATGGTATTTTATCTCTTTGCAAATATTC
AGAAATAAATACCATTATATATTATATAATGGATCTGTAGGTCCCTTGTT
GCCACACTATCAAATAGGTTTGTTAAGTTTACAAACTTGGGACTTTCTTG
ACAGTTTTTTCATATGAATTGGGTTTTTTTTAATGGCTTATAAACACCTA
CATCTTGTGGTGCAAAACTAGTTCTAGAACACTCATAATATCAGTGAACT
CAATACCACTTTCACACTTCCAATGGCGATGAACTTAAAATATCAGAAAG
CACTTGTTTCTATTTTGCTGAATTGTACCTGGTCCAACTGAAGAAGAAAT
GAGACATGATTTTGTGCTAGAAATAAAGATGCCAATCTGTCTGGTATTTA
TGAAATTTTCCTAATTGACAAAATGATAATTTCTTAAGAATTATGTAT

Query= MSMg01no514_c06.g1 MSMg01no514_c06.g1 CHROMAT_FILE:
MSMg01no514_c06.g1 PHD_FILE: MSMg01no514_c06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:44:55 2005
         (486 letters)



>mm_chr4_50301996_50302881
          Length = 886

 Score =  932 bits (482), Expect = 0.0
 Identities = 485/486 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   tgtgtcctgtataccaagcttaattgcctaataaatgctaaatgataaaaataaagtact 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 tgtgtcctgtataccaagcttaattgcctaataaatgctaaatgataaaaataaagtact 627

                                                                       
Query: 61  cttaaaattaggtatattgtcaagtatttttggaatggtattttatctctttgcaaatat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 cttaaaattaggtatattgtcaagtatttttggaatggtattttatctctttgcaaatat 567

                                                                       
Query: 121 tcagaaataaataccattatatattatataatggatctgtaggtcccttgttgccacact 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 tcagaaataaataccattatatattatataatggatctgtaggtcccttgttgccacact 507

                                                                       
Query: 181 atcaaataggtttgttaagtttacaaacttgggactttcttgacagttttttcatatgaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 506 atcaaataggtttgttaagtttacaaacttgggactttcttgacagttttttcatgtgaa 447

                                                                       
Query: 241 ttgggttttttttaatggcttataaacacctacatcttgtggtgcaaaactagttctaga 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 ttgggttttttttaatggcttataaacacctacatcttgtggtgcaaaactagttctaga 387

                                                                       
Query: 301 acactcataatatcagtgaactcaataccactttcacacttccaatggcgatgaacttaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 acactcataatatcagtgaactcaataccactttcacacttccaatggcgatgaacttaa 327

                                                                       
Query: 361 aatatcagaaagcacttgtttctattttgctgaattgtacctggtccaactgaagaagaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 aatatcagaaagcacttgtttctattttgctgaattgtacctggtccaactgaagaagaa 267

                                                                       
Query: 421 atgagacatgattttgtgctagaaataaagatgccaatctgtctggtatttatgaaattt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 atgagacatgattttgtgctagaaataaagatgccaatctgtctggtatttatgaaattt 207

                 
Query: 481 tcctaa 486
           ||||||
Sbjct: 206 tcctaa 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 486
Length of database: 886
Length adjustment: 10
Effective length of query: 476
Effective length of database: 876
Effective search space:   416976
Effective search space used:   416976
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)