XXXXXXXXXXXXXXXXXXXXXXXXTTTCGAGGATCCGCGGAATTCATTTC
CCAGATCGAAGAGTGTGCGTGCAAGTAATTCATGTTTGCATATAATTTCC
ATGTTACAGCTATAACTTTGTGGCGGGCATCATATCAGGGATTAAAATAA
AGGCTTTGCATTTACTATAGTATACTCATCCCACTTTGTGCCAATTCAAC
CATTTTCCACTTATAGACAGATCTTCAATGGAGATCTTCAACCCAAGCCC
GTAGTTTTAGTGAACTTGGGTGTCAGTAGGGTTTGGAGAAAGGGAGCTGA
CCATGAGGAGGCATGGATACTCATCTGGGAAGCAGGAGGATGATACGCCA
TCCTTCTCTCCTTCCCCTCTATTAAAGGTGGCTCCCTGTTAGGAAATACC
GCAGTCACACAGAGGAATCTGTGATATACAGAATGGTTGGGGTGTTAGTT
ACTTTTCTGTTGCTGTGATAAACTATCATGAGCAAAGCTAGTTAGAGAAG
GAAGAATTTATTTTGGTTTAAGGTTCCAGGGGGAAAATCCATAATGGTGG
GGGAAGGCGTGGTGGGATGAGACTAGAACAGAAATCTGAGAGTCCACCTC
ATCAACTCTAAACACAAATCCAAGAGCTATATGCCAGTAATGCACTTTCT
TCAGGGAGACTATACTTTCCAAGGGTTTCACACTGTTGCCAAGCAGCACC
ACCCAGTGGGCACCAGGGTTGAAATTCTAAAGCCGGGGGGGCATTCTTAT
TTAGAC

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXAATAGGATATAGAAACATAGAGGAGGACTCAGGC
TGCAATAAAGATGAAATTGAAAAACCCATAGCTTAACTAGAAAAATCAAA
GGAAAGCTTTAAAAGTAGAATGAATCAAGCAAAAGATAGAATATTATGAT
TCAAAGACAAAGTAGAGCATCTGGAACAGATTCGAAAGGAATAAGAAAAA
AATTTTAAAAAAAAACCTCGCAAGAAGGAACATAGAGGTAATGAGCATGG
GACTCTGAAAAACAAAAAACAAAACAAAACAAAACAAAAAAACAACCAAA
CCTTCAAGCTATGGGCATAGATGAAGGAGAAGAATCCCAACTTGATGGCA
TAAACCAGACCTTCAACAAGGTCATAGAAGAAAACTTGCCAAAACTAAGG
ACAGACACATCCATACAAATAATGCACATAGGACCCAAATAGATAAGACC
AGAAAAAAGAAAGTAATATACATAGTAATATTACTAAGTATACAGAACAG
AGAGGGTGTACTGAATACTGCAAGAGAGTCTGGGCGGGGATCCCAAAACC
ACAAGTCACATATAAAGGAAAACACAACAGGCTAACAGTCAATTCCCAAC
GGAAACTTTGAGATGCAGAAGAGCCAATGCACTCCACATCCCTGAATACC
ACNNACAGTCACTAANNAACAGATACCCAGCAAAACTACTTGCCATGATT
GGAAGAAGAAGAAAAACTTTT

Query= MSMg01no514_d19.b1 MSMg01no514_d19.b1 CHROMAT_FILE:
MSMg01no514_d19.b1 PHD_FILE: MSMg01no514_d19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:45:03 2005
         (491 letters)



>mm_chr4_95240559_95241449
          Length = 891

 Score =  890 bits (460), Expect = 0.0
 Identities = 478/484 (98%)
 Strand = Plus / Plus

                                                                       
Query: 8   ggaattcatttcccagatcgaagagtgtgcgtgcaagtaattcatgtttgcatataattt 67
           |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 ggaattcatttcccagaaagaagagtgtgcgtgcaagtaattcatgtttgcatataattt 267

                                                                       
Query: 68  ccatgttacagctataactttgtggcgggcatcatatcagggattaaaataaaggctttg 127
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 ccatgttacagctataactttgtggcgggcatcatatcagggattaaaataaaggctttg 327

                                                                       
Query: 128 catttactatagtatactcatcccactttgtgccaattcaaccattttccacttatagac 187
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 catttactatagtatactcatcccactttgtgccaattcaaccattttccacttatagac 387

                                                                       
Query: 188 agatcttcaatggagatcttcaacccaagcccgtagttttagtgaacttgggtgtcagta 247
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 388 agatcttcaatggagatcttcaacccaagcccatagttttagtgaacttgggtgtcagta 447

                                                                       
Query: 248 gggtttggagaaagggagctgaccatgaggaggcatggatactcatctgggaagcaggag 307
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 gggtttggagaaagggagctgaccatgaggaggcatggatactcatctgggaagcaggag 507

                                                                       
Query: 308 gatgatacgccatccttctctccttcccctctattaaaggtggctccctgttaggaaata 367
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 508 gatgatacgccatccttctctccttcccctctattaaaggtggctccccgttaggaaata 567

                                                                       
Query: 368 ccgcagtcacacagaggaatctgtgatatacagaatggttggggtgttagttacttttct 427
           | ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 cggcagtcacagagaggaatctgtgatatacagaatggttggggtgttagttacttttct 627

                                                                       
Query: 428 gttgctgtgataaactatcatgagcaaagctagttagagaaggaagaatttattttggtt 487
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 gttgctgtgataaactatcatgagcaaagctagttagagaaggaagaatttattttggtt 687

               
Query: 488 taag 491
           ||||
Sbjct: 688 taag 691


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 491
Length of database: 891
Length adjustment: 10
Effective length of query: 481
Effective length of database: 881
Effective search space:   423761
Effective search space used:   423761
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)