ATCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCTGTATTTTCATCTTTTCTAACACCTATGAATCATCCCCTCAATA
AGAACCTAGAAACACCAGTAATTTAAAGGTTTAAAACAATGGTATGAGAC
ATTGAAATTTTAACATGTTAAATCACAATTCTTTGTGTTTGAGAAGGTAA
GTGCCCAACTTGAGATCTATCCCATAGGCAAGAACCAATCCTTGACACTA
TTAATGATATTCTGTTATGCTATAGACAGGAGCCTAACATAACTGTTCTC
TGAGAGGCTCCAACCAGCAACTGACCTGAGCTCAGGAAGCCTTGTGGAAA
GGTTTGGGGAAGGATTGAGGGACCTGGAATGGATAGCTACTCAATAAGAA
GACCAACAGAATCTACTAACCTGGATCTTTGGAGGCTTCCAGAGACTGAA
CCACCAAGCAACAAGCATACATGCACATATTTAGCATATGTGCAGCTTGG
TCTTCATTTGGGTCCTCCAACAACTGAAGCAGGGGCTGACTGTCCCTGAC
TCTGCTGCGTACCTGTGGATCTTGTTCCCCTAACTGAGCTGCTTTGTATG
GTGGCCTCAGTGGAAGAGGGTGTGCCTAGGACTGCAGTGACTTGATGTGC
TAGGGTAGAATGGTACCCAGCCCACACTTTTCTCAGAAGAGAAGAGGCAG
AGATGGAAGAATGGAGAGAGGGACTGTGTGAGGGATTGGAACTANGAGAA
TTGGGGGGAGGGGCTGGGTTCCAGATGTAAAGTGAATAA

CCCATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXATCTGTGAGGAGAGCAAAGTGATATC
TGCAGAAAACTGGAGAGCTTACACTACACTAAAACATTAGGCCTAGTAAA
TGAGTTTACTAAGGGCTCAACATATACAACTATGGAATAAAAAAAAGTGG
CATTTCTATAGGCTAACAGTATTGGGAAATGTTTGACTAATATTTGTTAT
AATAGCAAAATACAAAACACACAGGGATAAATTGGAGGAGAGAGGTAAAG
GACTTGGACTCTGAAAATTATAAAGCACTGAGGACAAAAGTTAGCAGAAG
ACATGAGTAGCTTAGAGATCGCTTTTGCTCATGCACTGGAAGAATTAATA
GTGTTAAAATGTACTGAGTGTCCAAAATGTTCTACAGACCAAATGCAATC
CCTATCAAATTTCCAATAACATTTTTCAAAGATAAGAAGACAATCTTAGA
ATTCATTTGAAAACACAAAGGGGCAAAGGACAAGTAGTTTCAGATATGCA
AGATGAATGGGTCCTGGATATCAGATCTGCAGCACCGTGGCTGCAGTTAT
TACTGTTTTCTACACATAGAAATTGGGTATGAGGGTAGATAATAAATGTC
TCAAAATAAAAAAAAATGTGGTAAGTGGAAGAAGCCCTGATTGTATGTTT
ATTATGGACAAAGTACCCCAATACTTTAGACCTATGTACTTGGGATACTG
AATCCTTGCCCCTGGCCCAGTACGGATGATAACACTGGT

Query= MSMg01no515_l10.b1 MSMg01no515_l10.b1 CHROMAT_FILE:
MSMg01no515_l10.b1 PHD_FILE: MSMg01no515_l10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:47:08 2005
         (641 letters)



>mm_chr4_90964887_90965927
          Length = 1041

 Score = 1193 bits (617), Expect = 0.0
 Identities = 632/637 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctgtattttcatcttttctaacacctatgaatcatcccctcaataagaacctaga 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctgtattttcatcttttctaacacctatgaatcatcccctcaataagaacctaga 264

                                                                       
Query: 65  aacaccagtaatttaaaggtttaaaacaatggtatgagacattgaaattttaacatgtta 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aacaccagtaatttaaaggtttaaaacaatggtatgagacattgaaattttaacatgtta 324

                                                                       
Query: 125 aatcacaattctttgtgtttgagaaggtaagtgcccaacttgagatctatcccataggca 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aatcacaattctttgtgtttgagaaggtaagtgcccaacttgagatctatcccataggca 384

                                                                       
Query: 185 agaaccaatccttgacactattaatgatattctgttatgctatagacaggagcctaacat 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 agaaccaatccttgacactattaatgatattctgttatgctatagacaggagcctaacat 444

                                                                       
Query: 245 aactgttctctgagaggctccaaccagcaactgacctgagctcaggaagccttgtggaaa 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 aactgttctctgagaggctccaaccagcaactgacctgagctcaggaagccttgtggaaa 504

                                                                       
Query: 305 ggtttggggaaggattgagggacctggaatggatagctactcaataagaagaccaacaga 364
           ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||
Sbjct: 505 ggtttggggaaggattgagggacctggaatgtatacctactcaataagaagaccaacaga 564

                                                                       
Query: 365 atctactaacctggatctttggaggcttccagagactgaaccaccaagcaacaagcatac 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 atctactaacctggatctttggaggcttccagagactgaaccaccaagcaacaagcatac 624

                                                                       
Query: 425 atgcacatatttagcatatgtgcagcttggtcttcatttgggtcctccaacaactgaagc 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 atgcacatatttagcatatgtgcagcttggtcttcatttgggtcctccaacaactgaagc 684

                                                                       
Query: 485 aggggctgactgtccctgactctgctgcgtacctgtggatcttgttcccctaactgagct 544
           ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 aggggttggctgtccctgactctgctgcgtacctgtggatcttgttcccctaactgagct 744

                                                                       
Query: 545 gctttgtatggtggcctcagtggaagagggtgtgcctaggactgcagtgacttgatgtgc 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 gctttgtatggtggcctcagtggaagagggtgtgcctaggactgcagtgacttgatgtgc 804

                                                
Query: 605 tagggtagaatggtacccagcccacacttttctcaga 641
           |||||| ||||||||||||||||||||||||||||||
Sbjct: 805 tagggtggaatggtacccagcccacacttttctcaga 841


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 641
Length of database: 1041
Length adjustment: 10
Effective length of query: 631
Effective length of database: 1031
Effective search space:   650561
Effective search space used:   650561
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)