Query= MSMg01no516_e19.b1 MSMg01no516_e19.b1 CHROMAT_FILE:
MSMg01no516_e19.b1 PHD_FILE: MSMg01no516_e19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:47:58 2005
(689 letters)
>mm_chr4_109592765_109593854
Length = 1090
Score = 1185 bits (613), Expect = 0.0
Identities = 632/640 (98%), Gaps = 4/640 (0%)
Strand = Plus / Minus
Query: 1 ttaataagtgaattagcaggattgcaggatataagacatacgcaaacaattacatttcta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 ttaataagtgaattagcaggattgcaggatataagacatacgcaaacaattacatttcta 581
Query: 61 tatactaac---aaatgatcagaacttgcaagtttaaatacatcatttatgaaagcataa 117
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 tatactaacaataaatgatcagaacttgcaagtttaaatacatcatttatgaaagcataa 521
Query: 118 aatacatgaaatattgtgaaaaaacacacaaatgatctgtacatcaaaggtagtaaaata 177
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 aatacatgaaatattctgaaaaaacacacaaatgatctgtacatcaaaggtagtaaaata 461
Query: 178 ttattaagaaattaaggatctgttcaagggcagcctagtctatagagagttctagaacag 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 ttattaagaaattaaggatctgttcaagggcagcctagtctatagagagttctagaacag 401
Query: 238 tcaaggctatatacaaagaaattctgtcttgactcccccacccctcatat-cccccaaag 296
||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||
Sbjct: 400 tcaaggctatatacaaagaaattctgtcttgactcccccacccgtcatatccccccaaag 341
Query: 297 gaaacttaggatctaagtaaatggaaagaaataactttcatgtattagaaaaatcagggt 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 gaaacttaggatctaagtaaatggaaagaaataactttcatgtattagaaaaatcagggt 281
Query: 357 ttttatgacaattatctccaaaactaagtgtttttatgacaattctctttaaaagatcta 416
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 280 ttttatgacaattatctccaaaactaagtgtttttatgataattctctttaaaagatcta 221
Query: 417 tggattcaacgtaattccaaccaaaatatctgaagaaactagcaagcgcatgcagaaatg 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 tggattcaacgtaattccaaccaaaatatctgaagaaactagcaagcgcatgcagaaatg 161
Query: 477 catgggacctagaacaattgcaaaagctctgagaaaaacagccaaggctcctttgactat 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160 catgggacctagaacaattgcaaaagctctgagaaaaacagccaaggctcctttgactat 101
Query: 537 ccacattcgtcatgatgctaaagcaaatacatagtgtcagcataaagacagagcanagga 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 100 ccacattcgtcatgatgctaaagcaaatacatagtgtcagcataaagacagagcaaagga 41
Query: 597 aaaggtggaattcagatatggacctatgttttataaacaa 636
||||||||||||||||||||||||||||||||||||||||
Sbjct: 40 aaaggtggaattcagatatggacctatgttttataaacaa 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 689
Length of database: 1090
Length adjustment: 10
Effective length of query: 679
Effective length of database: 1080
Effective search space: 733320
Effective search space used: 733320
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no516_e19.g1 MSMg01no516_e19.g1 CHROMAT_FILE:
MSMg01no516_e19.g1 PHD_FILE: MSMg01no516_e19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:47:58 2005
(385 letters)
>mm_chr4_109418027_109418811
Length = 785
Score = 737 bits (381), Expect = 0.0
Identities = 384/385 (99%)
Strand = Plus / Plus
Query: 1 taggggtaattccaagggtcagttctgagtagggagacaggattggagtccaggtttaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 taggggtaattccaagggtcagttctgagtagggagacaggattggagtccaggtttaag 260
Query: 61 tattgaaatcaagttagctaacaatttagaggtaagttagatagacaattggtgccaaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tattgaaatcaagttagctaacaatttagaggtaagttagatagacaattggtgccaaat 320
Query: 121 ttgagaatacctctgatttctggattttaataattatagtagcaatgacaaagtccaact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttgagaatacctctgatttctggattttaataattatagtagcaatgacaaagtccaact 380
Query: 181 tatggaaaatgctaaaatagaaaatatatattactcaaaggacaaaagggatttcaagat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tatggaaaatgctaaaatagaaaatatatattactcaaaggacaaaagggatttcaagat 440
Query: 241 aatgtaaagtatttaataaggaagggtgacatgaaattatcatttctgccaagccctttg 300
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 441 aatgtaaagtatttaataaggaatggtgacatgaaattatcatttctgccaagccctttg 500
Query: 301 cacatagtattttccttaagtccttacagtaagtcataagtaggtatttttacccacatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cacatagtattttccttaagtccttacagtaagtcataagtaggtatttttacccacatt 560
Query: 361 ttgcactgatgaagtttagtgaaaa 385
|||||||||||||||||||||||||
Sbjct: 561 ttgcactgatgaagtttagtgaaaa 585
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 385
Length of database: 785
Length adjustment: 9
Effective length of query: 376
Effective length of database: 776
Effective search space: 291776
Effective search space used: 291776
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
