XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCATCTCT
TATATGGTTGAGAGATAAATTAATATCTAGGCTTGAATTATTAATTCCAA
ATTTCCCAAAGGAAGAAACATGACTTGGAGACACGCTGGTAAGTGTACAT
TTCTTGTAGGCAATCTGTAGGGATTTACTTTTGAGAAAATATCAATCTTG
ACTGATAACATTGTGAGTAAATTCATTTTCAGAGGGAGGAAAATCTCACT
CTAATGGCTCAAAAGTGACCAGTCTGACTTCAGAGCTCATGTTATAAATT
TTTAAGAATGTTCCAAGGAAGCAAATAAAGAGTTTGCTTATCTGAAGAAA
AATACACTGTAGCAGAAGACTGTCCACTTTCTTTTCAGATTTTTTTGTGG
AATATGTTGGCCTATTACCAACATGCATATATTAAAAAAAAAATACAGTT
CTTCTTAGGCATTGGCTTCTGGTCTATTTCCAAGTCTAAGGTGATTTAAA
TTACATGATTTCTCTGTGCATTTCAAATAAGGTTTTTAATATTTTAGTTT
TAAGTAATAAAATGCCATTCAACTGTGTAATTTATTACTAAATCCATTAA
TATTTATAGCTGAAAATGATTTTCCTGAATGGTGGAGAAAACCTTTCAGA
TCATTTCTTGCCTAAGAAAGTAAAAGCAACAACGATAAAGAATTCTATGA
CAGAAATACATTAAACAAATTTCTTTTTGTAAAGGTGAGAGACATAAACT
TTTC

GGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXTTTGTTCAGTTCTGAGCCCCATTTTTAATGGGGTTATT
TAATTTTCTGAAGTCCACCCTCTTGAGTTCTTTATATATGTTGGATATTA
GTCCCCTATCTGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTGGT
GGTCTTTTTGTCTTATTGCCGGTGTCTTTTGCCTTGCAGAAACTTTGGAG
TTTCATTAGGTCCCATTTGTCAATTCTCGATCTTACAGTACAAGCCATTG
CTGTTCTGTTCAGGAATATTTCCCCTGTGCCCATATCTTCAAGGCTTTTC
CCCACTTTCTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGAAGTTC
CTTGATCCACTTAGATTTGACCTTAGTACAAGGAGATAAGTATGGATCGA
TTCGCATTCTTCTACACAATAACAACAAGTTGTGCCAGCACCAATTGTTG
AAAATGCTGTCTTTCTTCCACTGGATGGTTTTAGTTCCTTGTCGAAGATC
AAGTGACCATAGGTGTGTGGGTTCATTTCTGGGTCTTCAATTCTATTCCA
TTGGTCTACTTGTCTGTCTCTATACCAGTACCATGCAGTTTTTATCACAA
TTGCTCTGTAGTAAAGCTTTAGGTCAGGCATGGTGATTCCACCAGAGGTT
CTTTTATCCTTGAGAAGACTTTTTGCTATCCTAGGTTTTTTGTTATTCCA
GATGAATT

Query= MSMg01no519_p18.b1 MSMg01no519_p18.b1 CHROMAT_FILE:
MSMg01no519_p18.b1 PHD_FILE: MSMg01no519_p18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:52:53 2005
         (698 letters)



>mm_chr4_7831265_7832360
          Length = 1096

 Score = 1317 bits (681), Expect = 0.0
 Identities = 691/695 (99%), Gaps = 2/695 (0%)
 Strand = Plus / Minus

                                                                       
Query: 4   ggaattcatctcttatatggttgagagataaattaatatctaggcttgaattattaattc 63
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 896 ggaattcatcttttatatggttgagagataaattaatatctaggcttgaattattaattc 837

                                                                       
Query: 64  caaatttcccaaaggaagaaacatgacttggagacacgctggtaagtgtacatttcttgt 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 836 caaatttcccaaaggaagaaacatgacttggagacacgctggtaagtgtacatttcttgt 777

                                                                       
Query: 124 aggcaatctgtagggatttacttttgagaaaatatcaatcttgactgataacattgtgag 183
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 776 aggcaatctgtagggatttacttttgagaaaatatcaatcttggctgataacattgtgag 717

                                                                       
Query: 184 taaattcattttcagagggaggaaaatctcactctaatggctcaaaagtgaccagtctga 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 716 taaattcattttcagagggaggaaaatctcactctaatggctcaaaagtgaccagtctga 657

                                                                       
Query: 244 cttcagagctcatgttataaatttttaagaatgttccaaggaagcaaataaagagtttgc 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656 cttcagagctcatgttataaatttttaagaatgttccaaggaagcaaataaagagtttgc 597

                                                                       
Query: 304 ttatctgaagaaaaatacactgtagcagaagactgtccactttcttttcagatttttttg 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 ttatctgaagaaaaatacactgtagcagaagactgtccactttcttttcagatttttttg 537

                                                                       
Query: 364 tggaatatgttggcctattaccaacatgcatatattaaaaaaaaaatacagttcttctta 423
           ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||
Sbjct: 536 tggaatatgttggcctattaccaacatgcatatatt--aaaaaaaatacagttcttctta 479

                                                                       
Query: 424 ggcattggcttctggtctatttccaagtctaaggtgatttaaattacatgatttctctgt 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 ggcattggcttctggtctatttccaagtctaaggtgatttaaattacatgatttctctgt 419

                                                                       
Query: 484 gcatttcaaataaggtttttaatattttagttttaagtaataaaatgccattcaactgtg 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 gcatttcaaataaggtttttaatattttagttttaagtaataaaatgccattcaactgtg 359

                                                                       
Query: 544 taatttattactaaatccattaatatttatagctgaaaatgattttcctgaatggtggag 603
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 taatttattactaaatccattaatatttatagctgaaaatgattttcctgaatggtggag 299

                                                                       
Query: 604 aaaacctttcagatcatttcttgcctaagaaagtaaaagcaacaacgataaagaattcta 663
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 aaaacctttcagatcatttcttgcctaagaaagtaaaagcaacaacgataaagaattcta 239

                                              
Query: 664 tgacagaaatacattaaacaaatttctttttgtaa 698
           |||||||||||||||||||||||||||||||||||
Sbjct: 238 tgacagaaatacattaaacaaatttctttttgtaa 204


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 698
Length of database: 1096
Length adjustment: 10
Effective length of query: 688
Effective length of database: 1086
Effective search space:   747168
Effective search space used:   747168
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)