AATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCTCACCTGATGAATACCGAATGGCTGAGAAGCACCTGAAAAAATG
TTCAACATCCTTAATCATCAGGAAAATGTAAATCAAAACAACCTTGAGAT
TCCACCTCACACCAGACAGAATGGCTAAGATCAAAAACTCAGATGACAGC
AGATGCTGGCGAGGATGTGGAGAAAGAGGAACACTCCTCCATTGCTGGTG
GAATTGCAAGCTGGTACAACCACTCTGGAAATCAGTTTGGCGGTTCCTCA
GAAAATTGGGCACAGTACTACCAGAAGATCCAGCAATACCTCTCCTGGGC
ATGTAACCAGAAGATGCCCCAACTGGTAATAAGGACACATGCTCCACTAT
GTTCATAGCATCCTTATTTATAATAGCCAGAAGCTGGAAAGAACCCAGAT
GTCCCTCACAGAGGAATGGATACAGAAAATGTGGTACATTTATGCAATGG
AGTACTCCTCAGCTACTAAAAACAATGAATTTATGAAATTCTTAGGCAAA
TGGATGGATCTGGAGGATATCATCCTGAGTGCGGTAACCCAATCACAAAA
GAACACACATGATATGCACTCACTGATAAGTGAATATTAGCCCAGAAACT
TAGAATACCCAAGATACAATTTGCAAAACACATGAAACTAAAGAAGAAGG
AAGAACAAAGTGTGGATACTTCATTCCTCCTTAGAATGGGGAACAAAATA
CCCATGGAAGGAGTT

NACGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXACTCTGTAGACCAGGCTGGCCTC
AAACTCAGAAATCTGCCTGCCTCTGCTTCCTGAGTGCTGGGATTAAAGGC
GTGTGCCACCACTGCCTGGCCCATCTTATCTTTTGAGATGGTCTCTCACT
AACCTTGGAGTTTGGCTAGAGCAGCTGGCTAGCCAGCCCTGAGATGCACC
TCTCTTTGGCTGTCTGGAGTTCCTGATTCATGCTGTGTCTGCAGTGACTG
TTACATGGGTATTGAGTATTCCCAGCTTAGGGCCTTATGTTTGCACATAC
CACTTTATTTAATGAAGTCTCCCCTACTTCAACTATTTCTCCATTTATAA
GACTATTTTCATTTTATATGTATGATTGTTTATCTCCACGTGTGCATGTC
TAATCTGTCAGATCTTCTGGGACTGGAGTTGCAGAAATGTGCTCTATTCA
TGTTGATGGATGGTTTCTGTTGTGGTGTTTTTCAGGTTAGTATTGCTGAG
GATGAGAAGATCTGCAGCACCAAGTCAGGTGCAGGGAAAGTCCTTTAAAA
AAACAAGATTCATACCTCCAGGAAGAAGTAATGCAGATGTGAGTAAGGAG
ATCACAAAGATGAGTCCAGATCCAAAACTGTTTCANGTAAATCAAAGAAN
GGGGTCAGGATAGGATCTCCCCCCTCCTCCCTCTCTCCCTTTCTCTCCTA
AGACTAGGTATTGG

Query= MSMg01no521_a24.g1 MSMg01no521_a24.g1 CHROMAT_FILE:
MSMg01no521_a24.g1 PHD_FILE: MSMg01no521_a24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:54:17 2005
         (574 letters)



>mm_chr4_11489816_11490789
          Length = 974

 Score = 1087 bits (562), Expect = 0.0
 Identities = 571/574 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   actctgtagaccaggctggcctcaaactcagaaatctgcctgcctctgcttcctgagtgc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actctgtagaccaggctggcctcaaactcagaaatctgcctgcctctgcttcctgagtgc 260

                                                                       
Query: 61  tgggattaaaggcgtgtgccaccactgcctggcccatcttatcttttgagatggtctctc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgggattaaaggcgtgtgccaccactgcctggcccatcttatcttttgagatggtctctc 320

                                                                       
Query: 121 actaaccttggagtttggctagagcagctggctagccagccctgagatgcacctctcttt 180
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tctaaccttggagtttggctagagcagctggctagccagccctgagatgcacctctcttt 380

                                                                       
Query: 181 ggctgtctggagttcctgattcatgctgtgtctgcagtgactgttacatgggtattgagt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggctgtctggagttcctgattcatgctgtgtctgcagtgactgttacatgggtattgagt 440

                                                                       
Query: 241 attcccagcttagggccttatgtttgcacataccactttatttaatgaagtctcccctac 300
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 attcccagcttagggcctcatgtttgcacataccactttatttaatgaagtctcccctac 500

                                                                       
Query: 301 ttcaactatttctccatttataagactattttcattttatatgtatgattgtttatctcc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttcaactatttctccatttataagactattttcattttatatgtatgattgtttatctcc 560

                                                                       
Query: 361 acgtgtgcatgtctaatctgtcagatcttctgggactggagttgcagaaatgtgctctat 420
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 561 acgtgtgcatgtctaatctgtcagatcttctgggactggagttacagaaatgtgctctat 620

                                                                       
Query: 421 tcatgttgatggatggtttctgttgtggtgtttttcaggttagtattgctgaggatgaga 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tcatgttgatggatggtttctgttgtggtgtttttcaggttagtattgctgaggatgaga 680

                                                                       
Query: 481 agatctgcagcaccaagtcaggtgcagggaaagtcctttaaaaaaacaagattcatacct 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 agatctgcagcaccaagtcaggtgcagggaaagtcctttaaaaaaacaagattcatacct 740

                                             
Query: 541 ccaggaagaagtaatgcagatgtgagtaaggaga 574
           ||||||||||||||||||||||||||||||||||
Sbjct: 741 ccaggaagaagtaatgcagatgtgagtaaggaga 774


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 574
Length of database: 974
Length adjustment: 10
Effective length of query: 564
Effective length of database: 964
Effective search space:   543696
Effective search space used:   543696
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)