Query= MSMg01no521_n12.b1 MSMg01no521_n12.b1 CHROMAT_FILE:
MSMg01no521_n12.b1 PHD_FILE: MSMg01no521_n12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:55:18 2005
(447 letters)
>mm_chr4_6853280_6854126
Length = 847
Score = 826 bits (427), Expect = 0.0
Identities = 442/447 (98%)
Strand = Plus / Plus
Query: 1 gtgtaacggccacaattctgctctgacctgcagcctgctttaagagtggcacggactggc 60
|||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 201 gtgtaaaggccacaattctgctctgacctgcagcctgctttaacagtggcacggactggc 260
Query: 61 tggatggtcatgaagtacagaatacacaaggtcagtatgaatcacacccaaggtgattcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tggatggtcatgaagtacagaatacacaaggtcagtatgaatcacacccaaggtgattcc 320
Query: 121 taatcagaaggcaaactaaacacagttaagattcaaaaacagactcctagaatccctaaa 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 321 taatcagaaggcaaactaaacacagttaagattcaaaaacagactcctagaatcccgaaa 380
Query: 181 ttctgcggtcctgtgctccattctctctcatgctcttgcctagaaaacaaaagtgtcttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttctgcggtcctgtgctccattctctctcatgctcttgcctagaaaacaaaagtgtcttc 440
Query: 241 tagcataagtaagtcataatgtaagtaagtaagcaacaagtgagtaatgggtaagaagtt 300
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 441 tagcataagtaagtcataatgtaaggaagtaagcaacaagtgagtaatgggtaagaagtt 500
Query: 301 gacttttacagaacttaaaaatacatgtattttctggctaaatacttttggttaccatgg 360
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 501 gacttttacagaacttaaaaatacatgtattttctgactaaatacttttggttaccatgg 560
Query: 361 aaggaggccaaaatacttaaagactccattttcctttaagctcaaaggatttaccaggaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aaggaggccaaaatacttaaagactccattttcctttaagctcaaaggatttaccaggaa 620
Query: 421 gttaaaactaaaacaggtttccagagg 447
|||||||||||||||||||||||||||
Sbjct: 621 gttaaaactaaaacaggtttccagagg 647
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 447
Length of database: 847
Length adjustment: 10
Effective length of query: 437
Effective length of database: 837
Effective search space: 365769
Effective search space used: 365769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no521_n12.g1 MSMg01no521_n12.g1 CHROMAT_FILE:
MSMg01no521_n12.g1 PHD_FILE: MSMg01no521_n12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:55:18 2005
(334 letters)
>mm_chr4_7035148_7035881
Length = 734
Score = 592 bits (306), Expect = e-173
Identities = 327/334 (97%)
Strand = Plus / Minus
Query: 1 caccccaaaaggccatgtgactttggaagagtgaggctggtgtggtagtgacttgccaat 60
|||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 638 caccccaaaaggtcatgtgactttggaagagagaggctggtgtggtagtgacttgccaat 579
Query: 61 gggaacttagcaaatcagataacaagatttcagagctctgggttagaaagcctgccagag 120
||||||||||||| |||| ||||||||||||||| |||||||||||||||||||||||||
Sbjct: 578 gggaacttagcaagtcaggtaacaagatttcagaactctgggttagaaagcctgccagag 519
Query: 121 atgagaactaggcctgtctgtgccatcccagtgatagcatggattgtttattatacttcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 atgagaactaggcctgtctgtgccatcccagtgatagcatggattgtttattatacttcc 459
Query: 181 tgttatagaaggattaacatcatacttcattcaatattcagataccattgattgctattt 240
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 tgatatagaaggattaacatcatacttcattcaatattcagataccattgattgctattt 399
Query: 241 agcaacatttattaaatacacatttgtacctgacctttacattcttattttagctcacca 300
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 398 agcaacatttattaaatacacatttgtacctgacctttacgttcttattttagctcacca 339
Query: 301 ttctaggttacaggccatcatagtgggacagtca 334
||||||||||||||||||||||||||||||||||
Sbjct: 338 ttctaggttacaggccatcatagtgggacagtca 305
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 334
Length of database: 734
Length adjustment: 9
Effective length of query: 325
Effective length of database: 725
Effective search space: 235625
Effective search space used: 235625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
