TACTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCTGGGGCTGGTAAGGGAGAAACTGAATATCCAGTGGAAGGTGTC
TACCCAGATTATTTGTACTGGGAATAGGTGATATTACACAGTGAATCAGG
ACAGGAAGGAGAGAGGGAGCCTCCTGATGTCATGTTAATGTGGTACAGAC
TGCCCCCACACACACACATGATCAAAATATTTTTTCTGGAGATAAAATCA
TAAGATAATGGTTTACTTACCCAAATCAAATTTTCTCAAAATTCAGGTTT
TTATTTGTTTTGTTTTGTTTTGTTTTGTTTGTCTATTGATTTTTTACAGG
GTCTAGCATAGGCCTAGAACTCACTAGATAAGCTGGCTGGTCTCTAACTC
ATAAATGTTGCCAACCCAGAGCAGGAGTAAAGGCACGCGTCATCCATGAT
TGATTCTCATTATTTTTAGACTGTCATGTTGGTGCACACTGGTAATCTCA
ACAGTTAGGAGATAGAGAAAGTAGGTACTCTGGGTCATCTCTACCGATTT
GGTCAGTTTGAGTCATCCTTACCCTCAGGAGACTTGCAAATCTAAAATTA
AATAGAATTTTAAAATTCATTATTTTATTCTCTATCAGTATCATTTATCT
CCGACCCTTCATTTCAAACTCTTCAGTTGAAGTTTCTTCTCTTATCCAGG
AGAGCAAGGCTTCTTTTGCCTTTGCTCCAGTCTTAGGTGAAGTCTCCTGT
GGCC

CGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGGCAGAG
AAGCACCTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAATGCAAAT
CAAAACAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGATCA
AAAATTCAGGTGACAGCAGATGCTGGCAAGGATGTGGAGAAAGAGGAACA
CTCCTCCATTGTTGGTGGGATTGCAAGCTTTTACAACCACTCTGGAAATC
AGTCTGGTGGTTCCTCAGAAAATTGGACATAGTACTACCGGAGGATCCAA
CAATACCTCTCCTGAGCATATATCCAGAAGATGTCCCAACCGGTAAGAAG
GACACATGCTCCACTATGTTCATAATAGCCTTATTTATAATAGCCAGAAG
CTGGAAAGAACCCAGATGCCCCTCAACAGAGGAATGGATACAGAAAATGT
GGTACATTTACACAATGGAATACTACTCAGCTATTAAAAAGAATGAATTT
ACGAGATTCCTAGGCAAATGGATGGACCTGGAGGGCATCATCCTGAGTGA
GGTAACCCAATCACAAAAGAACTCAAATGAAATGTACTCACTGATAAGTG
GATATTAGCCCAGAAACTTAGTATAGCGAGGTATAAGGTACAAGATGCAA
AACACATGAAACTGAAGAAGAACGAAGACCAAAGTGTGGACACTTTGCAT
GATGACACC

Query= MSMg01no521_o21.b1 MSMg01no521_o21.b1 CHROMAT_FILE:
MSMg01no521_o21.b1 PHD_FILE: MSMg01no521_o21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:55:24 2005
         (680 letters)



>mm_chr4_37039512_37040591
          Length = 1080

 Score = 1249 bits (646), Expect = 0.0
 Identities = 660/668 (98%), Gaps = 7/668 (1%)
 Strand = Plus / Minus

                                                                        
Query: 13   gggctggtaagggagaaactgaatatccagtggaaggtgtctacccagattatttgtact 72
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1080 gggctggtaagggagaaactgaatatccagtggaaggtgtctacccagattatttgtact 1021

                                                                        
Query: 73   gggaataggtgatattacacagtgaatcaggacaggaaggagagagggagcctcctgatg 132
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1020 gggaataggtgatattacacagtgaatcaggacaggaaggagagagggagcctcctgatg 961

                                                                        
Query: 133  tcatgttaatgtggtacagactgcccccacacacacacatgatcaaaatattttttctgg 192
            |||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||
Sbjct: 960  tcatgttaatgtggtacagactg--cccacacacacacatgatcaaaatattttttctgg 903

                                                                        
Query: 193  agataaaatcataagataatggtttacttacccaaatcaaattttctcaaaattcaggtt 252
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 902  agataaaatcataagataatggtttacttacccaaatcaaattttctcaaaattcaggtt 843

                                                                        
Query: 253  tttatttgttttgttttgttttgttttgtttgtctattgattttttacagggtctagcat 312
            ||||     |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 842  ttta-----tttgttttgttttgttttgtttgtctattgattttttacagggtctagcat 788

                                                                        
Query: 313  aggcctagaactcactagataagctggctggtctctaactcataaatgttgccaacccag 372
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 787  aggcctagaactcactagataagctggctggtctctaactcataaatgttgccaacccag 728

                                                                        
Query: 373  agcaggagtaaaggcacgcgtcatccatgattgattctcattatttttagactgtcatgt 432
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 727  agcaggagtaaaggcacgcgtcatccatgattgattctcattatttttagactgtcatgt 668

                                                                        
Query: 433  tggtgcacactggtaatctcaacagttaggagatagagaaagtaggtactctgggtcatc 492
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667  tggtgcacactggtaatctcaacagttaggagatagagaaagtaggtactctgggtcatc 608

                                                                        
Query: 493  tctaccgatttggtcagtttgagtcatccttaccctcaggagacttgcaaatctaaaatt 552
            |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 607  tctaccgatttggtcagtttgagtcatccttaccctcaggagacttgctaatctaaaatt 548

                                                                        
Query: 553  aaatagaattttaaaattcattattttattctctatcagtatcatttatctccgaccctt 612
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547  aaatagaattttaaaattcattattttattctctatcagtatcatttatctccgaccctt 488

                                                                        
Query: 613  catttcaaactcttcagttgaagtttcttctcttatccaggagagcaaggcttcttttgc 672
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487  catttcaaactcttcagttgaagtttcttctcttatccaggagagcaaggcttcttttgc 428

                    
Query: 673  ctttgctc 680
            ||||||||
Sbjct: 427  ctttgctc 420


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 680
Length of database: 1080
Length adjustment: 10
Effective length of query: 670
Effective length of database: 1070
Effective search space:   716900
Effective search space used:   716900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)