Query= MSMg01no522_f07.b1 MSMg01no522_f07.b1 CHROMAT_FILE:
MSMg01no522_f07.b1 PHD_FILE: MSMg01no522_f07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:55:55 2005
(627 letters)
>mm_chr4_5167143_5168169
Length = 1027
Score = 1127 bits (583), Expect = 0.0
Identities = 613/623 (98%)
Strand = Plus / Plus
Query: 5 gaattcttttaagactttcctacatgaatactccactgatatttccccattcctctaaac 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcttttaagactttcctacatgaatactccactgatatttccccattcctctaaac 264
Query: 65 cctctaactaacccatgcttcctaactcctttccatgctgattattgttatatttcacag 124
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 265 cctctaactaacccatgcttcctaactcctttccatgctgattattgttatagttcacag 324
Query: 125 gctttcctacaggttaggggtactgattgtcattcttccttggtagcttgcatggcacct 184
|||||||||||||||||| ||||| |||| ||||||||||||||||||||||||||||||
Sbjct: 325 gctttcctacaggttaggagtactaattgccattcttccttggtagcttgcatggcacct 384
Query: 185 gctatcctgtgagagctagacttcagtgaagaggtttccaggacattttcagcttgattc 244
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 385 gctatcctgtgagagctagacttcagtgaagaggtttccagaacattttcagcttgattc 444
Query: 245 ctcaagtcccacatctaaagtatgagaaccactttggccacaaactagaatggattaatt 304
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ctcaagtcccacatctaaagtgtgagaaccactttggccacaaactagaatggattaatt 504
Query: 305 tcaatatctgtcactggcgattttgtggggtattgtatggctctttcaggaccattataa 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tcaatatctgtcactggcgattttgtggggtattgtatggctctttcaggaccattataa 564
Query: 365 tcctaagtattttggccccattacgtgtgtttgtaggcatattaaaacatctggtttcac 424
|||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 565 tcctaagtattttggctccattatgtgtgtttgtaggcatattaaaacatctggtttcac 624
Query: 425 agatttttttcagacatcctagacttaatttttctcatcctcttctctttctctgtatca 484
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 625 agatttttttcagacatcctaggcttaatttttctcatcctcttctctttctctgtatca 684
Query: 485 ccctatctcctcttccattggttaaaaatctctaaactagttgttttcttccccctacct 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 ccctatctcctcttccattggttaaaaatctctaaactagttgttttcttccccctacct 744
Query: 545 tttgtaatatccatgtcctactagtttcctctctagagctccactcccactacacacagt 604
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 745 tttgtaatatccatgtcctactagtttcctctctagagctccactcccattacacacagt 804
Query: 605 acattcatatttttatggattta 627
|||||||||||||||||||||||
Sbjct: 805 acattcatatttttatggattta 827
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 627
Length of database: 1027
Length adjustment: 10
Effective length of query: 617
Effective length of database: 1017
Effective search space: 627489
Effective search space used: 627489
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no522_f07.g1 MSMg01no522_f07.g1 CHROMAT_FILE:
MSMg01no522_f07.g1 PHD_FILE: MSMg01no522_f07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:55:55 2005
(317 letters)
>mm_chr4_5350484_5351200
Length = 717
Score = 571 bits (295), Expect = e-167
Identities = 313/327 (95%), Gaps = 13/327 (3%)
Strand = Plus / Minus
Query: 1 tttcaggagtttgcatc-------------tttttttttttttaatttctgtggatgtac 47
||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 394 tttcaggagtttgcatcttttttttttttttttttttttttttaatttctgtggatgtac 335
Query: 48 ttactttgaattcttggcagggattcatccaactcagatttactggatgcataactaagg 107
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 334 ttactttgaattcttggcagggattcatccaactcagatttactggatgcataactatgg 275
Query: 108 gattagtaaatcttggaggttgtatttcccaagttgttcacatttcttgtgggtttttgt 167
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 gattagtaaatcttggaggttgtatttcccaagttgttcacatttcttgtgggtttttgt 215
Query: 168 gtgtgtgtgtgtgcgtgtgttgggacttgactttcatgtttagttatgttgactgagtat 227
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 gtgtgtgtgtgtgcgtgtgttgggacttgactttcatgtttagttatgttgactgagtat 155
Query: 228 atgtggagtgtgtgtttgcatagagtgtggtttatgtgtgtatatatgtgcatttttata 287
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 atgtggagtgtgtgtttgcatagagtgtggtttatgtgtgtatatatgtgcatttttata 95
Query: 288 tgtgtgtgtatgtggagtgtgtgtgtg 314
|||||||||||||||||||||||||||
Sbjct: 94 tgtgtgtgtatgtggagtgtgtgtgtg 68
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 317
Length of database: 717
Length adjustment: 9
Effective length of query: 308
Effective length of database: 708
Effective search space: 218064
Effective search space used: 218064
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
