Query= MSMg01no522_i18.b1 MSMg01no522_i18.b1 CHROMAT_FILE:
MSMg01no522_i18.b1 PHD_FILE: MSMg01no522_i18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:56:10 2005
(608 letters)
>mm_chr4_100465521_100466528
Length = 1008
Score = 1137 bits (588), Expect = 0.0
Identities = 600/604 (99%)
Strand = Plus / Plus
Query: 5 gaattctctaaaatgtttttctccacaaagcattcacatttccttgcaaaatctgaaact 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctctaaaatgtttttctccacaaagcattcacatttccttgcaaaatctgaaact 264
Query: 65 ctcattgtgaatcaaattcatcaggagaaacttaagtaaacaatgacataagtaacgctt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ctcattgtgaatcaaattcatcaggagaaacttaagtaaacaatgacataagtaacgctt 324
Query: 125 catgtatttaatgtccacttcaagccatgcagtcgttgggaatgctggagtggttgatca 184
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 325 catgtatttaatgtccacttcaagtcatgcagtcgttgggaatgctggagtggttgatca 384
Query: 185 aatacagcctgctttccacttgggctggggcacacattcttctgaagttagttggtaagc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aatacagcctgctttccacttgggctggggcacacattcttctgaagttagttggtaagc 444
Query: 245 aggctgggaacagcagggagcaaaggtcagttcagggaaattatttgtatgcaaagctta 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 aggctgggaacagcagggagcaaaggtcagttcagggaaattatttgtatgcaaagctta 504
Query: 305 agactctggcttcatggatgcaaatggatcatgtgccttggaggaccaattctgagggat 364
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 505 agactctggcttcatggatgcaaatgggtcatgtgccttggaggaccaattctgagggat 564
Query: 365 taactctttcctgctagtctgcttcaagttgtatttcttcattctgacacctttagctga 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 taactctttcctgctagtctgcttcaagttgtatttcttcattctgacacctttagctga 624
Query: 425 cgctcaagtggcctgtaaacaattactgcgctctcttcttcctctgtgtttcttagaaac 484
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ctctcaagtggcctgtaaacaattactgcgctctcttcttcctctgtgtttcttagaaac 684
Query: 485 caataacttggtttctcatttattttataactctgctgccattttcttgactctctattc 544
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 caataacttggtttctcatttattttataactctgctgccattttcttgactctctattt 744
Query: 545 tgcccccaccagtgccttccaggaaggctaacctggtagctttgtggatgtgcttttgaa 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 tgcccccaccagtgccttccaggaaggctaacctggtagctttgtggatgtgcttttgaa 804
Query: 605 ggcc 608
||||
Sbjct: 805 ggcc 808
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 608
Length of database: 1008
Length adjustment: 10
Effective length of query: 598
Effective length of database: 998
Effective search space: 596804
Effective search space used: 596804
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no522_i18.g1 MSMg01no522_i18.g1 CHROMAT_FILE:
MSMg01no522_i18.g1 PHD_FILE: MSMg01no522_i18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:56:10 2005
(611 letters)
>mm_chr4_100666856_100667866
Length = 1011
Score = 1141 bits (590), Expect = 0.0
Identities = 605/610 (99%), Gaps = 1/610 (0%)
Strand = Plus / Minus
Query: 2 aggacagctaaggctatatagagaagaaaaaaatttacacttatttgtgtatgtgtgcct 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1011 aggacagctaaggctatatagagaagaaaaaaatttacacttatttgtgtatgtgtgcct 952
Query: 62 gtacactgtggtgtggggcagtcagaggtaacttggggggaatcagctctttccttctgt 121
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 951 gtacactgtggtgtggggcagtcagaggtaactt-gggggaatcagctctttccttctgt 893
Query: 122 catgtggattccatggattgaactcaggtcatcaggcatggctgcaagaatctctaccca 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 892 catgtggattccatggattgaactcaggtcatcaggcatggctgcaagaatctctaccca 833
Query: 182 ctgagccatctaaccagcccccaccttctcgatggagaaaaactagaaagcaatctgtgt 241
||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 832 ctgagccatctcaccagcccccaccttctcgatggagaaaaacttgaaagcaatctgtgt 773
Query: 242 ggtcagggccctttagcttgacacttttctcaaaccatgtcatgcttgggtgtatccttt 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 772 ggtcagggccctttagcttgacacttttctcaaaccatgtcatgcttgggtgtatccttt 713
Query: 302 ggggaaactatgtcaaaataaattagcttacgaacagaacaggagaaagagagagtcagt 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712 ggggaaactatgtcaaaataaattagcttacgaacagaacaggagaaagagagagtcagt 653
Query: 362 ctgtgcccgcctcccacagcatagcccaggcctctgggagctcgaatgccggacaccaga 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 ctgtgcccgcctcccacagcatagcccaggcctctgggagctcgaatgccggacaccaga 593
Query: 422 tcttaccatgatcactttcagttcccgagcggccccagtagcgtcgcctcctttctggac 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 tcttaccatgatcactttcagttcccgagcggccccagtagcgtcgcctcctttctggac 533
Query: 482 tgtgtacgtgtcgctccatgactgcagctatgaaccgggtgttgctgactgcaggacatc 541
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 532 tgtgtacgtgtcgctccatgactgcagctatgaaccgggtgttgctgactgtaggacgtc 473
Query: 542 acggacaattaatgtcattcctgtgccagtgccttcattgttcaacccccttgctctgag 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 acggacaattaatgtcattcctgtgccagtgccttcattgttcaacccccttgctctgag 413
Query: 602 catgcccact 611
||||||||||
Sbjct: 412 catgcccact 403
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 611
Length of database: 1011
Length adjustment: 10
Effective length of query: 601
Effective length of database: 1001
Effective search space: 601601
Effective search space used: 601601
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
