Query= MSMg01no526_c02.b1 MSMg01no526_c02.b1 CHROMAT_FILE:
MSMg01no526_c02.b1 PHD_FILE: MSMg01no526_c02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:00:57 2005
(597 letters)
>mm_chr4_32921419_32922414
Length = 996
Score = 1085 bits (561), Expect = 0.0
Identities = 585/593 (98%), Gaps = 1/593 (0%)
Strand = Plus / Plus
Query: 5 gaattcatgcctgctgcttcctttccataccaaaaacatcacccagtgtctgccccatga 64
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcatgcctgctgtttcctttccataccaaaaacatcacccagtgtctgccccatga 264
Query: 65 gatcacagcaagcctcagactcaggacctgagaaccgatatttggttgggataggctggc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gatcacagcaagcctcagactcaggacctgagaaccgatatttggttgggataggctggc 324
Query: 125 atgcctggcattgtgccctcgacacagaagcaagcaagaaatttaattatcaaagagaag 184
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 325 atgcctggcattgtgccctcgacact-aagcaagcaagaaatttaattatcaaagagaag 383
Query: 185 cctagattattccaacacgcttgtaccagctactcaaggccccacctttcctctgatcat 244
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 cctagattattccaacatgcttgtaccagctactcaaggccccacctttcctctgatcat 443
Query: 245 ttatttataccccctccctgtattttccatctgtcctctaaggagacgatatgggtcagg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ttatttataccccctccctgtattttccatctgtcctctaaggagacgatatgggtcagg 503
Query: 305 aatgttatttttggctatagtgtataaaaataaagtgttatcacccaagataaaaatcaa 364
|||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||
Sbjct: 504 aatgttatttttggctatagtgtagaaaaataaagtgttatcacccatgataaaaatcaa 563
Query: 365 aagctttaagctaaatcagcatttaccagaataacacccttagtgacctagtaggcttca 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 aagctttaagctaaatcagcatttaccagaataacacccttagtgacctagtaggcttca 623
Query: 425 tatataaccagagatttatatgatacactgataaatcctctgcccatgcataaaaaccag 484
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 gatataaccagagatttatatgatacactgataaatcctctgcccatgcataaaaaccag 683
Query: 485 tccacacacctgcttgcctgcttgcttgcctgcccatagatagggtctcacaatatccaa 544
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 cccacacacctgcttgcctgcttgcttgcctgcccatagatagggtctcacaatatccaa 743
Query: 545 ggctagcctcaaacctgctatgtagccaagtcatttgtgaattgtgtttgtca 597
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 ggctagcctcaaacctgctatgtagccaagtcatttgtgaattgtgtttgtca 796
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 597
Length of database: 996
Length adjustment: 10
Effective length of query: 587
Effective length of database: 986
Effective search space: 578782
Effective search space used: 578782
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no526_c02.g1 MSMg01no526_c02.g1 CHROMAT_FILE:
MSMg01no526_c02.g1 PHD_FILE: MSMg01no526_c02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:00:57 2005
(540 letters)
>mm_chr4_33085590_33086529
Length = 940
Score = 588 bits (304), Expect = e-172
Identities = 349/370 (94%), Gaps = 12/370 (3%)
Strand = Plus / Minus
Query: 182 acactgctcttgcaggggacttgggttcaattcccagcatcctacgggatggctcagtac 241
||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||
Sbjct: 940 acactgctcttgcaggggacttgggttcaattcccagcaccctacggggtggctcagtac 881
Query: 242 cacctgcaacttcagaaccagggcacctgacaccctctcatcctcttctggtcttctttg 301
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 880 cacctgcaacttcagaaccaggggacctgacaccctctcatcctcttctggtcttctttg 821
Query: 302 ggtacctgcactcgtgtgcattcacacgcacact----------cacacacacacttaaa 351
||||||||||||| |||||||||||||||||||| ||||||||||||||||
Sbjct: 820 ggtacctgcactcatgtgcattcacacgcacactcacacacacacacacacacacttaaa 761
Query: 352 aataagtaaataaatccagaactggcagggtggttcaggacagagtatgcctatgttccc 411
||||||||||||||||| | ||||||||||||||||||||||||||||||||| ||||||
Sbjct: 760 aataagtaaataaatccgggactggcagggtggttcaggacagagtatgcctacgttccc 701
Query: 412 taaaagaccct-aactaccttaaatgccattaaaaggaagaaagcgtggggtccaacagt 470
||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 700 taaaagaccctaaac-accttaaatgccattaaaaggaagaaagcgtggggtccaacagt 642
Query: 471 acaagcctgtgatcccagctgtctggccaggaaaggtacaaaaccacaagtttgcagcca 530
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 641 acaagcctgtgatcccagctgtctggccaggaaaggtacaaaataacaagtttgcagcca 582
Query: 531 gcctggtcaa 540
||||||||||
Sbjct: 581 gcctggtcaa 572
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 540
Length of database: 940
Length adjustment: 10
Effective length of query: 530
Effective length of database: 930
Effective search space: 492900
Effective search space used: 492900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
