NCCCTAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGCGC
GGAANNCAAGACCCTTTCCTAAACATAATTAAAACGATATATAGCAAACC
ACTAGCCAACATCAAAGTAAATGGAGAGAAACTTGAAGCAATCCCCACTA
AAATCAGGGTCTGGACAAGGCTGCCCACTCTCACTCTACCTATTCAATAT
AGTACTTGAAGTCCTAGCCAGAGCAATTAGACAACAAAAAGAGATTAAAG
GGATATAAATTGGAAAGGAAGAAGTCAAAATATCACTATTTGCAGATGAT
ATGATAGTATACATAAGTGAACCCAAAATTCCACCAAGTAGCTGGATTAT
AAAATTAACTCAAACAAATCAGTGGCCTTTCTCTACACAAAGGATGAACA
GGCTGAGAAAAAAATTAGGGACAAACACCCTTCATTATACTCACAAATAA
TATAAAATACCTTCTTGTGACTCTAAGCAAGTGAAAGATCTGTATGACAA
GAACTTCAAGTCTCTGAAGAGATAAATCGAAGAAGATCTCAGAAGATACA
TCTATGGTAATAAATATAAATATTTAAAATGCAGTTAGGAATTATTCTCG
TTTAGTAAGGTAAATTGGTAACAATGAATCAAAAGTATTTTGCAATAGCA
CATTGCTATCTTCATAAATCTGGAATTTGTATGACACAAGTCGTATGGCT
TTCTTTATACTTCATACTTGGTATATTTTTTGGATTCAAAACTAATATGA
ATTCCCCAACAAA

ACGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGGCAGA
GAAGCACCTGAAAAAATGTTCAACATCTTTAATCATCAGGGAAATGCAAA
TCAAAACAACCCTAAGATTCCACCTCACACCAGTCAGAATGTCTAAGATC
AAAAATTCAGGTGACAGCAGATGCTGGCGAGGATGTGGAGAAAGAGGAAC
ACTCCTCCATTGTTGGTGGGATTGCAGGCTTGTACAACCACTCTGGAAAT
CCGTCTGGCGGTTCCTCAGAAAATTGGACATAGTACTACCGGAGGATCCA
TCAATACCTCTCCTGGGCATATATCCAGAAGATGCCCCAACTGGTAAGAA
GGACACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAA
GCTGGAAAGAACCCAGATGCCCCTCAACAGAGGAATGGATACAGAAAATG
TGGTACATCTACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAATT
TATGAAATTCCTAGCCAAATGGATGGACCTGGAGGGCATCATCCTGAGTG
AGGTAACACATTCACAAAGGAACTCACACAATATGTACTCACTGATAAGT
GGATATTAGCCCAAAACCTAGGATACCCAAGATATAAGATACAATTTCCT
AAACAAATGAAACTCAAGAAAAATGAAGACTGAAGTGTGGACACTATGCC
CCTCCCTTAGAGTGGGAACAAACACN

Query= MSMg01no527_c22.b1 MSMg01no527_c22.b1 CHROMAT_FILE:
MSMg01no527_c22.b1 PHD_FILE: MSMg01no527_c22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:02:20 2005
         (650 letters)



>mm_chr4_92228305_92229354
          Length = 1050

 Score = 1241 bits (642), Expect = 0.0
 Identities = 648/650 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   tcctaaacataattaaaacgatatatagcaaaccactagccaacatcaaagtaaatggag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcctaaacataattaaaacgatatatagcaaaccactagccaacatcaaagtaaatggag 260

                                                                       
Query: 61  agaaacttgaagcaatccccactaaaatcagggtctggacaaggctgcccactctcactc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agaaacttgaagcaatccccactaaaatcagggtctggacaaggctgcccactctcactc 320

                                                                       
Query: 121 tacctattcaatatagtacttgaagtcctagccagagcaattagacaacaaaaagagatt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tacctattcaatatagtacttgaagtcctagccagagcaattagacaacaaaaagagatt 380

                                                                       
Query: 181 aaagggatataaattggaaaggaagaagtcaaaatatcactatttgcagatgatatgata 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaagggatataaattggaaaggaagaagtcaaaatatcactatttgcagatgatatgata 440

                                                                       
Query: 241 gtatacataagtgaacccaaaattccaccaagtagctggattataaaattaactcaaaca 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtatacataagtgaacccaaaattccaccaagtagctggattataaaattaactcaaaca 500

                                                                       
Query: 301 aatcagtggcctttctctacacaaaggatgaacaggctgagaaaaaaattagggacaaac 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aatcagtggcctttctctacacaaaggatgaacaggctgagaaaaaaattagggacaaac 560

                                                                       
Query: 361 acccttcattatactcacaaataatataaaataccttcttgtgactctaagcaagtgaaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 acccttcattatactcacaaataatataaaataccttcttgtgactctaagcaagtgaaa 620

                                                                       
Query: 421 gatctgtatgacaagaacttcaagtctctgaagagataaatcgaagaagatctcagaaga 480
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gatttgtatgacaagaacttcaagtctctgaagagataaatcgaagaagatctcagaaga 680

                                                                       
Query: 481 tacatctatggtaataaatataaatatttaaaatgcagttaggaattattctcgtttagt 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tacatctatggtaataaatataaatatttaaaatgcagttaggaattattctcgtttagt 740

                                                                       
Query: 541 aaggtaaattggtaacaatgaatcaaaagtattttgcaatagcacattgctatcttcata 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 741 aaggtaaattggtaacaatgaatcaaaagtattttgcaatagcacattgctatcttcatg 800

                                                             
Query: 601 aatctggaatttgtatgacacaagtcgtatggctttctttatacttcata 650
           ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 aatctggaatttgtatgacacaagtcgtatggctttctttatacttcata 850


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 650
Length of database: 1050
Length adjustment: 10
Effective length of query: 640
Effective length of database: 1040
Effective search space:   665600
Effective search space used:   665600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)