NATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCATTGAATGTTGACCATCTACTCTTGGGCAAGCAACATCTTTAAAA
GTACTTTGTTTTTCTGATAAGAGTCCCCTGAAGGAAACACTTGCAAGTAG
TTATTAATTATAGATAGCTTCTGGATTAGGGAAATGGACACAAGTCTACT
ACTCTTTCCAGCTCCAGACATCCACATATTGCAGACCCATGGAGGTCCTG
TGCGTGCTGCCTCAGTCTCTGTGATTTCACATGGATTTTGATTATATTGA
CTGAAAGGATTTTGTTTTCTTGATATCCTACCTTCTGTCTGGCTCTAATA
TTCTTTCTTTATCCTCTTCCACAGTGTAGATGTAACTTTTTTTGGCCAGA
TGTATTTGTTCCCTTGGAAGCTTACTGCTGAAATAATTCACTCTTTCTAG
TTGTCTCTGAACTCCTACTGGCTGATCCAACTCAGTTGTTCTGGCACAAA
TGCCTATCTAAGGTGTCAAAATCATACTAGATTCCCTTGGCTTCTGACTT
AATTCTTCTGCTTGTTCTCATATTAATGTTGAAAGTATATTCTCATCTCC
TGGCTCCTTCTCATTCTCTGGTTCCTTATGTCTTCACTTGTGTCTAGCTT
ATTCTCCCTGCAACCTGTCTCTAGTAAAATTGCTCTTTGTCTCTGCCCCT
TTTACTTCCTCACTTGTATGTTAAAATCTCACAGTTAGCTGGGGCACAAG
TCCC

NNNACGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXATTGGAAATTGCACAAATGAACG
TCAAGGAAATATAACTGCCAAATCAACAAATGGGGAAATAATTTTCAAAA
AGGAAACGCAAATGACCAGTAACTAGTTTTAAAAGTGTTCAATATTACAA
GCTATCATTATGTGTGGTGATAGAAGCTTAGGCTGTTGACTGTATCTTTA
AATATATATGCTAATAAAACATGCTCATCCACTTCTGATTTTCCCTGAAA
AGGATGCCACTTAAACATGGGAAATGTGTGTGAAAAAAATCATCTTACTT
AAGAGCGAAATCCAGCTGTTCACTGTTAAGTGAAATCTTTTATTTGAAAT
ATGAATGTCTCATTTTACCGCTCATGTCTTACGTGTTCAATTTATTCCAC
CCTTCGGTAAAGAGCACTTGTGGGGGGCGAAAGTCTTCGGAATTCTATGT
AGGAGTGCAGCTGTAAGTCCTTCCAGACTTACAGTCTCTAAGACATCTGA
GTAGGTATTACATCTAAAATTGCTAAGGAAAGTTGCTGCATTTAGCCAAA
ATATGTCACAAGAAAACAATTATCATTTCTTTTCCTAGATACTTAAAAAT
GTAAAGCTTTCAAAGTAGTATTTTTTCTGTGCTTGAATCATTTTGTAGAC
AATACAAATTTAATGTGAAGCTAGCCATGTAAATGTCAATAGTGGTACCC
TCTGGAGAGAGGGAC

Query= MSMg01no528_d23.g1 MSMg01no528_d23.g1 CHROMAT_FILE:
MSMg01no528_d23.g1 PHD_FILE: MSMg01no528_d23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:03:48 2005
         (621 letters)



>mm_chr4_27065963_27066984
          Length = 1022

 Score = 1102 bits (570), Expect = 0.0
 Identities = 609/622 (97%), Gaps = 1/622 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   attggaaattgcacaaatgaa-cgtcaaggaaatataactgccaaatcaacaaatgggga 59
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attggaaattgcacaaatgaaacgtcaaggaaatataactgccaaatcaacaaatgggga 260

                                                                       
Query: 60  aataattttcaaaaaggaaacgcaaatgaccagtaactagttttaaaagtgttcaatatt 119
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aataattttcaaaaaggaaacgcaaatgaccagtaactagttttaaaagtgttcaatatt 320

                                                                       
Query: 120 acaagctatcattatgtgtggtgatagaagcttaggctgttgactgtatctttaaatata 179
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acaagctatcattatgtgtggtgatagaagcttaggctgttgactgtatctttaaatata 380

                                                                       
Query: 180 tatgctaataaaacatgctcatccacttctgattttccctgaaaaggatgccacttaaac 239
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tatgctaataaaacattctcatccacttctgattttccctgaaaaggatgccacttaaac 440

                                                                       
Query: 240 atgggaaatgtgtgtgaaaaaaatcatcttacttaagagcgaaatccagctgttcactgt 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atgggaaatgtgtgtgaaaaaaatcatcttacttaagagcgaaatccagctgttcactgt 500

                                                                       
Query: 300 taagtgaaatcttttatttgaaatatgaatgtctcattttaccgctcatgtcttacgtgt 359
           |||||||||||||||||||||||||||||||||| ||||||| |||||||||||| ||||
Sbjct: 501 taagtgaaatcttttatttgaaatatgaatgtcttattttactgctcatgtcttaagtgt 560

                                                                       
Query: 360 tcaatttattccacccttcggtaaagagcacttgtggggggcgaaagtcttcggaattct 419
           |||||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||
Sbjct: 561 tcaatttattccaccctttggtaaagagcacttgtggggggtgaaagtcttcagaattct 620

                                                                       
Query: 420 atgtaggagtgcagctgtaagtccttccagacttacagtctctaagacatctgagtaggt 479
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 621 atgtaggagtgcagctgtaagtccctccagacttacagtctctaagacatctgagtaggt 680

                                                                       
Query: 480 attacatctaaaattgctaaggaaagttgctgcatttagccaaaatatgtcacaagaaaa 539
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 attacatctaaacttgctaaggaaagttgctgcatttagccaaaatatgtcacaagaaaa 740

                                                                       
Query: 540 caattatcatttcttttcctagatacttaaaaatgtaaagctttcaaagtagtatttttt 599
           ||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||| |
Sbjct: 741 caattatcatttcttttcccagatacttaaaaatgtaaagctttaaaagtagtattttat 800

                                 
Query: 600 ctgtgcttgaatcattttgtag 621
           ||||||||||||||||||||||
Sbjct: 801 ctgtgcttgaatcattttgtag 822


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 621
Length of database: 1022
Length adjustment: 10
Effective length of query: 611
Effective length of database: 1012
Effective search space:   618332
Effective search space used:   618332
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)