GCATGTGTGGTCCACCTCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXCGCGGAATTCTTTATTTTAAAAATTACTTTATGTATCTGAGT
ATACTGTTGCTGTCTCAGACACACCAGAAGAGGGCATCAGATTCCATTAC
AGATGGCTGTGAGCCACCATGTAGTTGCTGGGAATTGAACTCAGGACCTC
TGGAAGAGCAGTCTTAACCGCTCTTAACTCTTAACTGCTGAGCCATCTCT
CCAGTCCAAATAGAGAATTTGTAACAGAGGAATCTCTAATGTTCAAGAAG
CACCTTTAAAATATTCAGCTTTCTTAGTCATCAGGGAAATGCAAATCAAA
ATGTCTCTGAGATTTCATCTTACACCCATGCTCACATGTGGGTGAGGATG
TGGAGCATGGGGAACACTCCTCCATTGGTGGTGGGAGTGCAAACCTGTAC
AACCACTTTGGAAATCAATTTGGTTTTTTCTCAGAAGAGGGGAACAGGGA
TGTTGATTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTGCGTGTAT
GTGCTTTTCTTCCTCCTCTTTTTTTTTTTTCTTTTTTCCCCCTTTTTCCC
CTCTCCTTCCTTTGTTTATACCTCCTTTTCCTTTTTTCCATCTCTCCCCT
TCCTTGCGCTTTTTTCTCGCTTCTCTTCTTTATTTTTTACTCTTTCCCCC
CCCCCCCTTTTTTCCCCTCTTTTCTCCACCCCTTCACTCCTTTCTTG

NCCGATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXAGGGAAATCTTTTCACCATGGAT
TGCTTTGCGCACTCAAAGCAGTTCTTCATTTGATTAGAAAATACAAGTTA
CTAAGCACTTAGGACCATGTGAGCTTGTGGGTCACCCACGCTGGAAGAAA
TAGTCATGCTTCTTTATTATTTTTTTAATCTTTTATGGACATTGTTCCTC
TTCCCAAAAGGAAGTGTGGACCATTCTGATTTCTGTTGGTTTTGCTGTGA
AGTGCTGCGGCTCTAGTAACTGCCTTAGCAACGGTAGATGTCTGGGGTAA
ACGGTCCTGGGTTTTCCATTGGTTTTCATAATGGGTGTTTATATGAAACT
ACTAAAGACTTTTTAAATGGCTTGATGTAGCAGTCATAGCAAGTTTGTAA
ATAGCATCTATGTTACACTCTCCTAGAGTATAAAATGTGAATGTTTTTGT
AGCTAAATTGTAATTTGAAACTGGCTCACCCCAGTTTGTTGATTTCACAG
AGGGATTAAAATTGGCAAACATTCATATTTTTACTTCATTTTTAAAAACA
ACTGACTAATAGTTCTATATTTTCAAAATACTTGAAAAAATATTCCCAAA
TGATTTTAATTTAAAAACAATTTGGCTTTGTCTTATTGATCAGACAAAAA
AGAAGCTAGTATGGAGGGAAGCGCAAACACATTTATTTTGTATTGCAA

Query= MSMg01no533_e10.g1 MSMg01no533_e10.g1 CHROMAT_FILE:
MSMg01no533_e10.g1 PHD_FILE: MSMg01no533_e10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:10:27 2005
         (671 letters)



>mm_chr4_6614667_6615737
          Length = 1071

 Score = 1280 bits (662), Expect = 0.0
 Identities = 668/670 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   agggaaatcttttcaccatggattgctttgcgcactcaaagcagttcttcatttgattag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 870 agggaaatcttttcaccatggattgctttgcgcactcaaagcagttcttcatttgattag 811

                                                                       
Query: 61  aaaatacaagttactaagcacttaggaccatgtgagcttgtgggtcacccacgctggaag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 810 aaaatacaagttactaagcacttaggaccatgtgagcttgtgggtcacccacgctggaag 751

                                                                       
Query: 121 aaatagtcatgcttctttattatttttttaatcttttatggacattgttcctcttcccaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 750 aaatagtcatgcttctttattatttttttaatcttttatggacattgttcctcttcccag 691

                                                                       
Query: 181 aaggaagtgtggaccattctgatttctgttggttttgctgtgaagtgctgcggctctagt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 690 aaggaagtgtggaccattctgatttctgttggttttgctgtgaagtgctgcggctctagt 631

                                                                       
Query: 241 aactgccttagcaacggtagatgtctggggtaaacggtcctgggttttccattggttttc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 aactgccttagcaacggtagatgtctggggtaaacggtcctgggttttccattggttttc 571

                                                                       
Query: 301 ataatgggtgtttatatgaaactactaaagactttttaaatggcttgatgtagcagtcat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 ataatgggtgtttatatgaaactactaaagactttttaaatggcttgatgtagcagtcat 511

                                                                       
Query: 361 agcaagtttgtaaatagcatctatgttacactctcctagagtataaaatgtgaatgtttt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 agcaagtttgtaaatagcatctatgttacactctcctagagtataaaatgtgaatgtttt 451

                                                                       
Query: 421 tgtagctaaattgtaatttgaaactggctcaccccagtttgttgatttcacagagggatt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 tgtagctaaattgtaatttgaaactggctcaccccagtttgttgatttcacagagggatt 391

                                                                       
Query: 481 aaaattggcaaacattcatatttttacttcatttttaaaaacaactgactaatagttcta 540
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 390 aaaattggcaaacattcatatttttacttcatttttaaaaacaacttactaatagttcta 331

                                                                       
Query: 541 tattttcaaaatacttgaaaaaatattcccaaatgattttaatttaaaaacaatttggct 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 tattttcaaaatacttgaaaaaatattcccaaatgattttaatttaaaaacaatttggct 271

                                                                       
Query: 601 ttgtcttattgatcagacaaaaaagaagctagtatggagggaagcgcaaacacatttatt 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 ttgtcttattgatcagacaaaaaagaagctagtatggagggaagcgcaaacacatttatt 211

                     
Query: 661 ttgtattgca 670
           ||||||||||
Sbjct: 210 ttgtattgca 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 671
Length of database: 1071
Length adjustment: 10
Effective length of query: 661
Effective length of database: 1061
Effective search space:   701321
Effective search space used:   701321
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)