TGCGATGTGGTGNNGTTGTTTGTGGTGTCTCTATXXXXXXXXXXXXXXXX
XXXXXXXTCACTTATTATCGCGTAGAGGTATTCCCCGCCCGGGGGTTAAA
AAATTTTTTCCCCCCCAACCCCAAAAAAAATATTTTGGGGGGCGCGCCCC
CTAAAAAGGGGCTAAAAACAAAACCCCCCTCTTTCCTCTATCCTCTATTA
TTCATCTTCTATATTTTTNTTTTTCCAAGGAAACTTGTCACAAAAACTTT
CAAACTTGTAAAGACTAACCTTGGGTCCCATTTTTCCAAAACCTTGAAAA
ACTTTTCCATTTTGTGGAAACCTTCCCAACCCTTGGAAAAATTTTTCCCC
CCTTTCCCCAAATTTTTTTTTCTTTCCCCCTAAAAAAAAAAATGTGGGGC
CCCTCCCTTATAAAAAAAAAAACCCCTTTTTTTCCTCTTGGGGGGGTTCC
CTCTTTGTTTTTTTTTCCCTTCATACAAAAAAAAACAATTTTGTGGGTGG
GGAAATTTTTTTTTTTTATTCCTCAAAAAAATTTTTTTTTTGGCCAAAAA
AAATTTTTTTCTTTAGAAAAAAACACCACTTTTTTTGGGGGCCCCTCCCC
TCCTTAAAATAAAACCCCCCCGGTTTTTGGGTGGTATATAACTTTTTTCT
CCACCAATATTGGGGGGGGGTGTTTTTTTTTTTTCTCCCCCCCCGCGGGG
GCGTTTTTTTTTTTTTTTCACCCTCTTTTTG

NCCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXTCTATTCTCAGCAGAATTAGTCT
ACCATTGATGGAAATATCTCTAGTTTCTCTCTCTTGGGCTGTCAAGTTTG
TGCTGAGACTTCAGCAGTCAGCAGAAATGGGAGACATTTATATGTTGTTT
CCATTCTCTTGTGACCTTATCTTCTCATTATCTTTCACCTTTGGAACTTG
ATTATAAGATGTCTAGGGACTTGGTTAAGTGTAGATTGACTGGTAACTTT
TTTTATCTCAGAGGATATCTGTCAAAACAGTATTTATTCCCTTCCTTAGG
TAGGGTGAATTTTCATTTATAATAATTAGAATCAGATTCCCACTCAGATG
GCATTTTTGAGTCCCTGTTTAATCCCATTAACCCAAGTATTTGCTCTTTT
TAAACTACTTTTCACAAGGTCTTATACGCTTTTTCCATTTGTCTTCATTG
GTTTTGTTCTCTAGCATTGCTATACTTTCAGATTGGGTGGTCTGTGCTTC
ATCCATTCTTCCCTTTTCTATTTGTGACTGCTACTGTCTAGAACTTAAAC
ATAGTTTGCAATTTTTAAAATATTGCTGAATATATTTTAACTCTGCTTTC
TAGACACTCACTTTACCTTAAACTTTGATTGTTTCAGAATTTAACATATC
CATATAATGTAATTTGATCAAATCTACCCATTATTATACCCTTA

Query= MSMg01no533_m07.g1 MSMg01no533_m07.g1 CHROMAT_FILE:
MSMg01no533_m07.g1 PHD_FILE: MSMg01no533_m07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:11:03 2005
         (667 letters)



>mm_chr4_28186722_28187787
          Length = 1066

 Score = 1243 bits (643), Expect = 0.0
 Identities = 661/667 (99%), Gaps = 1/667 (0%)
 Strand = Plus / Minus

                                                                        
Query: 1    tctattctcagcagaattagtctaccattgatggaaatatctctagtttctctctcttgg 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1056 tctattctcagcagaattagtctaccattgatggaaatatctctagtttctctctcttgg 997

                                                                        
Query: 61   gctgtcaagtttgtgctgagacttcagcagtcagcagaaatgggagacatttatatgttg 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 996  gctgtcaagtttgtgctgagacttcagcagtcagcagaaatgggagacatttatatgttg 937

                                                                        
Query: 121  tttccattctcttgtgaccttatcttctcattatctttcacctttggaacttgattataa 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 936  tttccattctcttgtgaccttatcttctcattatctttcacctttggaacttgattataa 877

                                                                        
Query: 181  gatgtctagggacttggttaagtgtagattgactggtaactttttttatctcagaggata 240
            ||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||
Sbjct: 876  gatgtctagggacttggttaagtgtagtttgactggtaac-ttttttatctcagaggata 818

                                                                        
Query: 241  tctgtcaaaacagtatttattcccttccttaggtagggtgaattttcatttataataatt 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 817  tctgtcaaaacagtatttattcccttccttaggtagggtgaattttcatttataataatt 758

                                                                        
Query: 301  agaatcagattcccactcagatggcatttttgagtccctgtttaatcccattaacccaag 360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 757  agaatcagattcccactcagatggcatttttgagtccctgtttaatcccattaacccaag 698

                                                                        
Query: 361  tatttgctctttttaaactacttttcacaaggtcttatacgctttttccatttgtcttca 420
            ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 697  tatttgctctttttaaactacttttcacaaggtcttatacgctttttccgtttgtcttca 638

                                                                        
Query: 421  ttggttttgttctctagcattgctatactttcagattgggtggtctgtgcttcatccatt 480
            |||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 637  ttggttttgttctccagcattgctatactttcagattgggtggtttgtgcttcatccatt 578

                                                                        
Query: 481  cttcccttttctatttgtgactgctactgtctagaacttaaacatagtttgcaattttta 540
            |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 577  cttcccttttctatttgtgactgcaactgtctagaacttaaacatagtttgcaattttta 518

                                                                        
Query: 541  aaatattgctgaatatattttaactctgctttctagacactcactttaccttaaactttg 600
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517  aaatattgctgaatatattttaactctgctttctagacactcactttaccttaaactttg 458

                                                                        
Query: 601  attgtttcagaatttaacatatccatataatgtaatttgatcaaatctacccattattat 660
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457  attgtttcagaatttaacatatccatataatgtaatttgatcaaatctacccattattat 398

                   
Query: 661  accctta 667
            |||||||
Sbjct: 397  accctta 391


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 667
Length of database: 1066
Length adjustment: 10
Effective length of query: 657
Effective length of database: 1056
Effective search space:   693792
Effective search space used:   693792
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)