Query= MSMg01no538_n19.b1 MSMg01no538_n19.b1 CHROMAT_FILE:
MSMg01no538_n19.b1 PHD_FILE: MSMg01no538_n19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:17:37 2005
(689 letters)
>mm_chr4_114169339_114170427
Length = 1089
Score = 1303 bits (674), Expect = 0.0
Identities = 683/686 (99%)
Strand = Plus / Minus
Query: 4 ggaattctataggtaagactgaacctggagcaccctgcccccatcttaaccttggcattc 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 889 ggaattctataggtaagactgaacctggagcaccctgcccccatcttaaccttggcattc 830
Query: 64 tactatctctttctgatagtggtgaggtgtactctttatgactaataattttatctgtgg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 829 tactatctctttctgatagtggtgaggtgtactctttatgactaataattttatctgtgg 770
Query: 124 ctttgaactgaatagaacttgggagctgtgactcagtttctcctaaattaggcccaagag 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 769 ctttgaactgaatagaacttgggagctgtgactcagtttctcctaaattaggcccaagag 710
Query: 184 ctttcttgtttggagaggtaatcagactccaatttcagacgttccaaaatactttcagcc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 709 ctttcttgtttggagaggtaatcagactccaatttcagacgttccaaaatactttcagcc 650
Query: 244 ctgggtggcttcaactgattaaagcatttgaaccaactgctaaatgccatggcttccagc 303
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 ctgggtggcttcaactgactaaagcatttgaaccaactgctaaatgccatggcttccagc 590
Query: 304 ccagtgggaccctgggagaatgacctgcctcccatgggtacagtgaagaaagcgtgttaa 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 ccagtgggaccctgggagaatgacctgcctcccatgggtacagtgaagaaagcgtgttaa 530
Query: 364 cagagtgacaggctatatttctgtctctcagagtctcgagcaccccctcctcaagcagcc 423
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 529 cagagtgacaggctatatttctgtctctcagagtcttgagcaccccctcctcaagcagcc 470
Query: 424 ctgggtgctccttgccagtctcctttctcattagggtttctctgacaacctgaggattta 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 ctgggtgctccttgccagtctcctttctcattagggtttctctgacaacctgaggattta 410
Query: 484 caatgtaaaatgtttccatttccctgacatgatgcctctgcatcaaagcgcccgtgcctg 543
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 caatgtgaaatgtttccatttccctgacatgatgcctctgcatcaaagcgcccgtgcctg 350
Query: 544 ccctctgaagcctgggatgaaggtgacttcgagagggagacaaatgaatcactgggctga 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 ccctctgaagcctgggatgaaggtgacttcgagagggagacaaatgaatcactgggctga 290
Query: 604 cgcccatcccttcctttctccgtaatacatctgtttattattgaacaggggcttgcacgg 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 cgcccatcccttcctttctccgtaatacatctgtttattattgaacaggggcttgcacgg 230
Query: 664 ttctgtgatgaatggccttctcctcc 689
||||||||||||||||||||||||||
Sbjct: 229 ttctgtgatgaatggccttctcctcc 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 689
Length of database: 1089
Length adjustment: 10
Effective length of query: 679
Effective length of database: 1079
Effective search space: 732641
Effective search space used: 732641
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no538_n19.g1 MSMg01no538_n19.g1 CHROMAT_FILE:
MSMg01no538_n19.g1 PHD_FILE: MSMg01no538_n19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:17:37 2005
(601 letters)
>mm_chr5_18430806_18431805
Length = 1000
Score = 648 bits (335), Expect = 0.0
Identities = 344/347 (99%), Gaps = 1/347 (0%)
Strand = Plus / Minus
Query: 255 ttctaatgagaaagagaaagggaatgtatttgggtgggaggcaagatggggaggaaatgg 314
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 1000 ttctaatgagaaagagaaagggaatttatttgggtgggaggcaagatggggaggaaatgg 941
Query: 315 gaagagtagagcaagggacaaccatatataggatacattatatgagataaaaagctattc 374
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 940 gaagagtagagcaagggacaaccatatataggatacattatatgaaataaaaagctattc 881
Query: 375 taaaatacaaaagaaaaacaaaataaagtacataatttcatgaggatatattttctaaca 434
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 880 taaaatacaaaagaaaaacaaaataaagtacataatttcatgaggatatattttctaaca 821
Query: 435 aaattataaatattaaataactttcaagttgaaaatattgattattttcttttcttccta 494
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 820 aaattataaatattaaataactttcaagttgaaaatattgattattttcttttcttccta 761
Query: 495 aaaacttttatctattccattcaattcacatatattttcagtataaacaggtaaagtcat 554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 760 aaaacttttatctattccattcaattcacatatattttcagtataaacaggtaaagtcat 701
Query: 555 taaatttaaataattcattggggggaaacagaagtatttgttcttag 601
||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 700 taaatttaaataattcatt-gggggaaacagaagtatttgttcttag 655
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 601
Length of database: 1000
Length adjustment: 10
Effective length of query: 591
Effective length of database: 990
Effective search space: 585090
Effective search space used: 585090
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
