CTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTTCCTGCCTAAAAGATATTCAGGGACAAAAATGGAGAAGAGACTGA
GAGAAAGGCAGTCCAGTGACAAGCTCAGTTTGGGATCCATCTCAAGGGGG
GCCTCCAAGGTCTGACACCATTACTGATGCTATGGTGTGCTTACAGACAG
GAGCCTAGCAAGGCCATCCTCTGAGAGTCCCAACAAGAAGCTGACTCAGA
CAGAAGCAGATACTTACACCCAACGTCTGGACTAAAGTTGGGGACCCCAT
TGGTTGAATTAGGGAAAGTCTGAAAAAAGCTGAGGAAGAGAGAGACCCCA
TAGGAAAACCAGCAGTCTCAAATAACCTGGATCCCGGAGATCTCTCAGAC
ACTGAGCCACCAACCGGGAGCATACACTAGTTGGTCTGAGGCCCCTGACA
TGTATACAGAAGACGACTGCCTGGTCTGTCCTCCGTGGGAGAAGATGCAC
CTAACCCTCAAGAGACATGAGGCCCCCGGAAGAAGGGAAAACTCTTGGAG
ACAGAGGAAAGGAATGGGATGAGGAAATGTGGGAGGGCAGACCGGGATGG
GTGGCAATGACTGGACTGTAAAATAATAAAAGTGATAAAAAATATTCCAA
AGCTCAAGTGATTAAAAAAAAAAAACAATCAGAATTGGAAGTTGAAAGAG
GAAACTCATGTGTTCCAACATCAACAGATTGTTTCCTTTTAANNTATCAT
TACAGGTTAAAAACATTTGGATGN

CAATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXACTGAAAATGAATAGAGAATTAGAAG
GTGTGATTATCTCTGTAGCTATTGCACCAACTTTGAAGAGAAAAACTTAT
TGCTAGCCTAATAATAAATCAAGGCATTTCACAAGTTACCCAAATATCTC
TCACCTTGAGCTTTAGTGACTTTTGTTTTAAGAAATATCTAATTTAGAAT
CAATGTCAAATAGTGACTCTAGTTTCCAAAAACCCTTTTTTTATAGCTAT
TAATGTAAAGAAAAAGTTACTGCCATAATTTAAGTCAGACATGAAAAAAA
TCACATAGATAAAGATGGAGTACAAATGCATCAGGGACTGAGTTGTTAAC
TAGGTTAACAGAGAAATTACTGATTTGTAAGAATTAAAATCTCTGAGAGA
TGGTGCTAATAGGTGTACTTTTTATGCTGAAGCTAACTGGAAATAATATA
AACTAGGTCCTGTTCTTATGATGTTTTCTATAACCTTGATTTTTCTCACA
TTCAGTAATCCAAAGGGGCAAATGAAGAATCAGTGTGGTAAATTAAATCT
TCATTCTTACCCCCCAAAATACCTGAAAAGAAAGAACTTAGGAGAAGGAA
AGATTTATCTAGCCCTCTTGACTTTCAGATGGGTCACATTCCTGGTTAGA
TACCGGCAGGAAAAGGCTTTGAAAAAAACCCTCTTCATTTCCATGAAAAA
AGGAAAACCGTGCATTTGC

Query= MSMg01no541_c20.g1 MSMg01no541_c20.g1 CHROMAT_FILE:
MSMg01no541_c20.g1 PHD_FILE: MSMg01no541_c20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:20:43 2005
         (451 letters)



>mm_chr4_89994435_89995287
          Length = 853

 Score =  818 bits (423), Expect = 0.0
 Identities = 445/453 (98%), Gaps = 2/453 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   actgaaaatgaatagagaattagaaggtgtgattatctctgtagctattgcaccaacttt 60
           ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||
Sbjct: 653 actgaaaatgaatagagaattagaaggtgtgattatctctgtaactattgcaccgacttt 594

                                                                       
Query: 61  gaagagaaaaacttattgctagcctaataataaatcaaggcatttcacaagttacccaaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 gaagagaaaaacttattgctagcctaataataaatcaaggcatttcacaagttacccaaa 534

                                                                       
Query: 121 tatctctcaccttgagctttagtgacttttgttttaagaaatatctaatttagaatcaat 180
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 533 tatctctcaccttgagctttagtgccttttgttttaagaaatatctaatttagaatcaat 474

                                                                       
Query: 181 gtcaaatagtgactctagtttccaaaaaccc--tttttttatagctattaatgtaaagaa 238
           |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||
Sbjct: 473 gtcaaatagtgactctagtttccaaaaaccctttttttttatagctattaatgtaaagaa 414

                                                                       
Query: 239 aaagttactgccataatttaagtcagacatgaaaaaaatcacatagataaagatggagta 298
           ||| |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 413 aaaattactgccataatttaagtcagacataaaaaaaataacatagataaagatggagta 354

                                                                       
Query: 299 caaatgcatcagggactgagttgttaactaggttaacagagaaattactgatttgtaaga 358
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 caaatgcatcagggactgagttgttaactaggttaacagagaaattactgatttgtaaga 294

                                                                       
Query: 359 attaaaatctctgagagatggtgctaataggtgtactttttatgctgaagctaactggaa 418
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 attaaaatctctgagagatggtgctaataggtgtactttttatgctgaagctaactggaa 234

                                            
Query: 419 ataatataaactaggtcctgttcttatgatgtt 451
           |||||||||||||||||||||||||||||||||
Sbjct: 233 ataatataaactaggtcctgttcttatgatgtt 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 451
Length of database: 853
Length adjustment: 10
Effective length of query: 441
Effective length of database: 843
Effective search space:   371763
Effective search space used:   371763
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)