TCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTTGGTTTAGTTCTGAGCCCCATTTTTTTAATGGGGTTATTTGATTT
TCTGGAGTCCACCTTCTTGTGTTCTTTATATATATTGGATATTATTCCCC
TATCTGATTTAGGATAGGTAAAAAACCTTTCCCAATCTGTTGGTAGCCTT
TTTGTCTTATTGATAGTGTCTTCTGCCTTGCAGAAGCTTTGCAATTTTAT
GAGGCCCCATTTGTCGATTCACTATCTTAGAGCACAAGCCATTACCGTTG
TATTAAGGAATTTTTCCCCTGTGCCCATATCTTCGAGTCTTTCTCATACT
TTCTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGGAGTTCCTTAAT
GCACTTAGATTTGTCCTTAGTACAGGCAGATTGGAATGGATCAATTCGCA
TTCTTCTACATGATAACCAACAGTTGTGCCAGCACCATTTGTTGAAAATG
CTTTCTTCCACTGGATGGTTTTAGCTCCCTTGTCAAAGATCAAGTGATCA
TAGATGTGTGGGTTCATTTCTGAGTCTTCAATTCTATTCTATTGGTCTAC
TTTTCTGTCACTATACCAGTTTTTATCACAATTGCTCTTAGAACTCTTGC
ATGTGCTCAAGAAGAACGACGCTGCAACAGGATCCTTCTGCACATGTTTA
TTGGGAGAGCATTGATTGCATAGGTGAAAGAAGAACANCAACGAACAAGA
AAAATGATGCTGCTTACATC

CAATACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTTCCCTTCATCTCTGTTCCCTCTCTC
CTCTTAGACCGTGCACCACCACCCCAGAAGATATCCCTCATCACTGGAGC
TTCTAATCTCTGCAGAATTAGGTACATTCTCTTCCAATAAGGCCAGACAA
CACACAATAGAGGGTTTTGAACTTAGAAATTTCTCTATGATAGACAAGTG
CTTTATTAGGGAACTGTAGCCATTTTGAAAATCCTAGTATGATATATAAT
TTTACTAAGTGGATGTAGCTGACATTTGACTATCTATTTTAATTAAGTAG
GTTTTAAATTTGTGATTTTATTTTCTGCCTCAGCTTTTAAAAATGTTTGG
TACTGCAGTCATGTACCACCATGCCTGGCCAAAGATCTCACTTATACTAG
CATATATCTTTTTCATCAAATGATATGCCCTTGAAACCAAATTACTTTTC
TAACTGCTTCTTCAGTATTGCCACATTGGTCCTTAAGTTTTCGTGTCTGA
GTGTTGCGAGACATTCAAACAAAAGGATTTATAAATGTAAGATTTGCTGC
TAGGCTTTTGTCATCTTACTTCATGTTTTTCTTTAATATTGTCTTCACCA
TTATAAATTTTAGTAAAATTTTGAATTAGAAAGTTTGAATCTGTCACCTC
TTTTCTTTCCTTAACTACAACTTTTCCAGATCCCATTTAGAAGTGTCATA
AATAAGCACACTTATTT

Query= MSMg01no541_e20.g1 MSMg01no541_e20.g1 CHROMAT_FILE:
MSMg01no541_e20.g1 PHD_FILE: MSMg01no541_e20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:20:54 2005
         (657 letters)



>mm_chr4_17198991_17200045
          Length = 1055

 Score = 1077 bits (557), Expect = 0.0
 Identities = 632/657 (96%), Gaps = 2/657 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttcccttcatctctgttccctctctcctcttagaccgtgcaccaccaccccagaagatat 60
           |||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| |||
Sbjct: 201 ttcccttcatctctgttccctctctcctctgagaacgtgcaccaccaccccagaaggtat 260

                                                                       
Query: 61  ccctcatcactggagcttctaatctctgcagaattaggtacattctcttccaataaggcc 120
           |||||||||| |||||||| ||||||||||||||||||| |||||||||||| |||||||
Sbjct: 261 ccctcatcacgggagcttccaatctctgcagaattaggtgcattctcttccactaaggcc 320

                                                                       
Query: 121 agacaacacacaatagagggttttgaacttagaaatttctctatgatagacaagtgcttt 180
           ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 321 agacaacacacaatagaaggttttgaacttagaaatttctctatgattgacaagtgcttt 380

                                                                       
Query: 181 attagggaactgtagccattttgaaaatcctagtatgatatataattttactaagtggat 240
           |||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||
Sbjct: 381 attagggaactgtagccattttgaaagtcctagtatgatatataatttcactaagtggat 440

                                                                       
Query: 241 gtagctgacatttgactatctattttaattaagtaggttttaaatttgtgattttatttt 300
           ||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||
Sbjct: 441 gtagctgacatttgactatctattttaattaagtaggttctaaaattgtgattttatttt 500

                                                                       
Query: 301 ctgcctcagcttttaaaaatgtttggtactgcagtcatgtaccaccatgcctggccaaag 360
           |||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 501 ctgcctcagctttttaaaatgtttggtactgcagtcatgtacaaccatgcctggccaaag 560

                                                                       
Query: 361 atctcacttatactagcatatatctttttcatcaaatgatatgcccttgaaaccaaatta 420
           |||||||||||||||||||||||||||||||||||||||| |||||||| |||| | |||
Sbjct: 561 atctcacttatactagcatatatctttttcatcaaatgatgtgcccttgtaaccta-tta 619

                                                                       
Query: 421 cttttctaactgcttcttcagtattgccacattggtccttaagttttcgtgtctgagtgt 480
           |||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||
Sbjct: 620 cttttctaactgcttctttagtattgtcacattggtccttaagttttcgtgtctgagtgt 679

                                                                       
Query: 481 tgcgagacattcaaacaaaaggatttataaatgtaagatttgctgctaggcttttgtcat 540
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 680 tgcgagacattcaaacaaaaggatttataaatgtaagatttgcttctaggcttttgtcat 739

                                                                       
Query: 541 cttacttcatgtttttctttaatattgtcttcaccattataaattttagtaaaattttga 600
           |||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 740 cttacttcat-tttttctttactattgtcttcaccattataaattttagtaaaattttga 798

                                                                    
Query: 601 attagaaagtttgaatctgtcacctcttttctttccttaactacaacttttccagat 657
           |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 799 attagaaagtttgaatctgtcacctcttttctttccttaactacaactattccagat 855


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 657
Length of database: 1055
Length adjustment: 10
Effective length of query: 647
Effective length of database: 1045
Effective search space:   676115
Effective search space used:   676115
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)